RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 RFX8Q6ZV50 586 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 SP8Q8IXZ3 490 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 SNX31Q8N9S9 440 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 BTN2A2Q8WVV5 523 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 CCDC134Q9H6E4 229 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 ALG13Q9NP73 1137 aaKnown RBP12.1□□□□□ -0.47
VCL-202ENST00000372755 KLC4Q9NSK0 619 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 GIMAP4Q9NUV9 329 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 LRRIQ3A6PVS8 624 aaPredicted RBP12.1□□□□□ -0.47
VCL-202ENST00000372755 IL18RAPO95256 599 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 NMT1P30419 496 aaKnown RBP12.1□□□□□ -0.47
VCL-202ENST00000372755 ZNF200P98182 395 aaPredicted RBP12.1□□□□□ -0.47
VCL-202ENST00000372755 LRRC74AQ0VAA2 488 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 TADA1Q96BN2 335 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 OPTNQ96CV9 577 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 SGSM3Q96HU1 749 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 SMARCAD1Q9H4L7 1026 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 SLC38A7Q9NVC3 462 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 SNX12Q9UMY4 172 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 MYO1GB0I1T2 1018 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 CDH16O75309 829 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 APOA4P06727 396 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 SPRP35270 261 aaPredicted RBP12.1□□□□□ -0.47
VCL-202ENST00000372755 PPP3CCP48454 512 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 SKIV2LQ15477 1246 aaKnown RBP12.1□□□□□ -0.47
VCL-202ENST00000372755 CAPRIN2Q6IMN6 1127 aaKnown RBP12.1□□□□□ -0.47
VCL-202ENST00000372755 FAM162AQ96A26 154 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 TMA16Q96EY4 203 aaKnown RBP12.1□□□□□ -0.47
VCL-202ENST00000372755 RBM15Q96T37 977 aaKnown RBP eCLIP12.1□□□□□ -0.472e-6■■■□□ 17.5
VCL-202ENST00000372755 TASP1Q9H6P5 420 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 CATSPERBQ9H7T0 1116 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 CD274Q9NZQ7 290 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 RNF181Q9P0P0 153 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 SNX9Q9Y5X1 595 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 ARHGEF5Q12774 1597 aa12.1□□□□□ -0.47
VCL-202ENST00000372755 GSG1L2A8MUP6 293 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 TCF3P15923 654 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 MDH1P40925 334 aaKnown RBP12.09□□□□□ -0.47
VCL-202ENST00000372755 RUNX1T1Q06455 604 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 SLC18A3Q16572 532 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 EPHA10Q5JZY3 1008 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 BTNL9Q6UXG8 535 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 C4orf22Q6V702 233 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 KIAA2013Q8IYS2 634 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 DCP1BQ8IZD4 617 aaKnown RBP12.09□□□□□ -0.47
VCL-202ENST00000372755 SHCBP1Q8NEM2 672 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 SLC35G2Q8TBE7 412 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 CELF1Q92879 486 aaKnown RBP12.09□□□□□ -0.47
VCL-202ENST00000372755 LATS2Q9NRM7 1088 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 ROBO2Q9HCK4 1378 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 CFAP99D6REC4 459 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 TNPO2O14787 897 aaKnown RBP12.09□□□□□ -0.47
VCL-202ENST00000372755 IGKV5-2P06315 115 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 IMPDH2P12268 514 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 AASDHQ4L235 1098 aaPredicted RBP12.09□□□□□ -0.47
VCL-202ENST00000372755 LMBRD2Q68DH5 695 aaPredicted RBP12.09□□□□□ -0.47
VCL-202ENST00000372755 MUC3BQ9H195 1237 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 PALMDQ9NP74 551 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 RIC8BQ9NVN3 520 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 GID8Q9NWU2 228 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 IQCA1LA6NCM1 817 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 SUPT3HB4E1H0 165 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 CLASP2O75122 1294 aaKnown RBP12.09□□□□□ -0.47
VCL-202ENST00000372755 APRTP07741 180 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 RFC5P40937 340 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 AGAP3Q96P47 875 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 ASCC2Q9H1I8 757 aaPredicted RBP12.09□□□□□ -0.47
VCL-202ENST00000372755 EPN3Q9H201 632 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 PAK5Q9P286 719 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 FKBP9O95302 570 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 PLA2G4AP47712 749 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 IL31Q6EBC2 164 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 SHC4Q6S5L8 630 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 FKBP9P1Q75LS8 142 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 RAET1EQ8TD07 263 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 PPP1R36Q96LQ0 422 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 RAB6BQ9NRW1 208 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 DOLKQ9UPQ8 538 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 ZNF521Q96K83 1311 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 MAGEB2O15479 319 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 GUCA1CO95843 209 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 HPCAP84074 193 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 PDK1Q15118 436 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 LONP2Q86WA8 852 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 KLHL11Q9NVR0 708 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 NEU2Q9Y3R4 380 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 DISP1Q96F81 1524 aa12.09□□□□□ -0.47
VCL-202ENST00000372755 TBX3O15119 743 aa12.08□□□□□ -0.47
VCL-202ENST00000372755 AKR1B1P15121 316 aa12.08□□□□□ -0.47
VCL-202ENST00000372755 CCDC144BQ3MJ40 725 aa12.08□□□□□ -0.47
VCL-202ENST00000372755 SETD3Q86TU7 594 aaPredicted RBP12.08□□□□□ -0.47
VCL-202ENST00000372755 NDEL1Q9GZM8 345 aa12.08□□□□□ -0.47
VCL-202ENST00000372755 CAB39Q9Y376 341 aaPredicted RBP12.08□□□□□ -0.47
VCL-202ENST00000372755 CDC42BPGQ6DT37 1551 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 SSU72P8A0A1W2PR75 194 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 GOLGA8RI6L899 631 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 GUCY1A3Q02108 690 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 SV2CQ496J9 727 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 TRIM69Q86WT6 500 aa12.08□□□□□ -0.48
VCL-202ENST00000372755 HORMAD1Q86X24 394 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms