RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 ZC3H15Q8WU90 426 aaKnown RBP14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 ANKRD7Q92527 254 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 IFT43Q96FT9 208 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 OLFM3Q96PB7 478 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 NUDCD1Q96RS6 583 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 RABL2BQ9UNT1 228 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 FIS1Q9Y3D6 152 aa14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 ARHGEF28Q8N1W1 1705 aaKnown RBP14.03□□□□□ -0.16
RAPGEF1-201ENST00000372189 ATN1P54259 1190 aaPredicted RBP14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 MAP1SQ66K74 1059 aaPredicted RBP14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 GMCL1P1Q8NEA9 526 aa14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 WDR60Q8WVS4 1066 aa14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 GRAMD1AQ96CP6 724 aa14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 KCNF1Q9H3M0 494 aa14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 CD4P01730 458 aa14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 CHRNA3P32297 505 aa14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 EFHC2Q5JST6 749 aa14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 C1orf146Q5VVC0 180 aa14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 KCNV2Q8TDN2 545 aa14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 TGS1Q96RS0 853 aaKnown RBP14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 DDX50Q9BQ39 737 aaKnown RBP14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 TUBA8Q9NY65 449 aaPredicted RBP14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 KLHL8Q9P2G9 620 aaPredicted RBP14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 HDAC6Q9UBN7 1215 aa14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 IP6K2Q9UHH9 426 aa14.02□□□□□ -0.16
RAPGEF1-201ENST00000372189 A0A1W2PQC6 194 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 CDR2Q01850 454 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 ATF7IP2Q5U623 682 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 KIFC3Q9BVG8 833 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 SENP2Q9HC62 589 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 CPA4Q9UI42 421 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 LCP1P13796 627 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 PAMP19021 973 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 FAF2Q96CS3 445 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 FGD4Q96M96 766 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 KLC2Q9H0B6 622 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 MAP2P11137 1827 aaKnown RBP14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 MANSC4A6NHS7 340 aaPredicted RBP14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 NEMP1O14524 444 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 NCK2O43639 380 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 IL18RAPO95256 599 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 MOCS2O96007 188 aaPredicted RBP14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 ACOT2P49753 483 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 NUDT18Q6ZVK8 323 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 C3orf67Q6ZVT6 689 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 LRRC71Q8N4P6 559 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 TTC13Q8NBP0 860 aa14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 MRPL40Q9NQ50 206 aaKnown RBP14.02□□□□□ -0.17
RAPGEF1-201ENST00000372189 NUP85Q9BW27 656 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 MBD2Q9UBB5 411 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 MOSPD1Q9UJG1 213 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 SALL1Q9NSC2 1324 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 ATP1A1P05023 1023 aaKnown RBP14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 WDR72Q3MJ13 1102 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 USP50Q70EL3 339 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 PRMT7Q9NVM4 692 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 RICTORQ6R327 1708 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 C7orf25Q9BPX7 421 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 FSD1LQ9BXM9 530 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 WBP11Q9Y2W2 641 aaKnown RBP14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 TMX2Q9Y320 296 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 DDTLA6NHG4 134 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 RASSF10A6NK89 507 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 MEFVO15553 781 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 KRT38O76015 456 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 KRT14P02533 472 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 VSNL1P62760 191 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 FAM102AQ5T9C2 384 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 GIPC2Q8TF65 315 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 DHX38Q92620 1227 aaKnown RBP14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 TRIM9Q9C026 710 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 FHDC1Q9C0D6 1143 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 EPN3Q9H201 632 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 TRPC7Q9HCX4 862 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 ANKEF1Q9NU02 776 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 TEX33O43247 280 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 FOSL1P15407 271 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 TEDDM1Q5T9Z0 273 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 ZNF746Q6NUN9 644 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 KLC3Q6P597 504 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 ARRDC4Q8NCT1 418 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 HIPK4Q8NE63 616 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 ZNF564Q8TBZ8 553 aaPredicted RBP14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 PDCD6IPQ8WUM4 868 aaKnown RBP14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 WDR24Q96S15 920 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 OSBPL1AQ9BXW6 950 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 ETNK1Q9HBU6 452 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 SNX9Q9Y5X1 595 aa14.01□□□□□ -0.17
RAPGEF1-201ENST00000372189 TTC26A0AVF1 554 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 SMAPO00193 183 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 BRAFP15056 766 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 ACCSLQ4AC99 568 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 NOTUMQ6P988 496 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 TRMT10CQ7L0Y3 403 aaKnown RBP14□□□□□ -0.17
RAPGEF1-201ENST00000372189 SAMD3Q8N6K7 520 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 FAM167BQ9BTA0 163 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 DCDC2CA8MYV0 355 aa14□□□□□ -0.17
RAPGEF1-201ENST00000372189 PDHXO00330 501 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms