RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 XPO7Q9UIA9 1087 aaKnown RBP15.97■□□□□ 0.15
COL5A1-201ENST00000371817 NEU2Q9Y3R4 380 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 SNX13Q9Y5W8 968 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 MAGI1Q96QZ7 1491 aaPredicted RBP15.97■□□□□ 0.15
COL5A1-201ENST00000371817 SHROOM1Q2M3G4 852 aaPredicted RBP15.97■□□□□ 0.15
COL5A1-201ENST00000371817 DSEQ9UL01 958 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 A0A1W2PQC6 194 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 SLC16A1P53985 500 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 ANKRD49Q8WVL7 239 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 DCUN1D5Q9BTE7 237 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 SPAG6O75602 509 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 BCAR1P56945 870 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 ITGADQ13349 1161 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 C3orf62Q6ZUJ4 267 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 ANKS3Q6ZW76 656 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 RPF1Q9H9Y2 349 aaKnown RBP15.97■□□□□ 0.15
COL5A1-201ENST00000371817 PARVAQ9NVD7 372 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 TLR7Q9NYK1 1049 aaKnown RBP15.97■□□□□ 0.15
COL5A1-201ENST00000371817 RNMTO43148 476 aaKnown RBP15.97■□□□□ 0.15
COL5A1-201ENST00000371817 ANXA13P27216 316 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 ZSWIM7Q19AV6 140 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 MIS18BP1Q6P0N0 1132 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 SERPINB12Q96P63 405 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 TRIM49BA6NDI0 452 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 TRIM49D1C9J1S8 452 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 APOL1O14791 398 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 STK4Q13043 487 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 ZNF790Q6PG37 636 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 CLEC4GQ6UXB4 293 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 NDFIP2Q9NV92 336 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 THOC2Q8NI27 1593 aaKnown RBP15.97■□□□□ 0.15
COL5A1-201ENST00000371817 PGM3O95394 542 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 RAPGEF3O95398 923 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 SOX11P35716 441 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 UGP2Q16851 508 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 PCDHB6Q9Y5E3 794 aa15.97■□□□□ 0.15
COL5A1-201ENST00000371817 SORBS3O60504 671 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 H2AFYO75367 372 aaKnown RBP15.96■□□□□ 0.15
COL5A1-201ENST00000371817 TUBA4AP68366 448 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 DPP8Q6V1X1 898 aaPredicted RBP15.96■□□□□ 0.15
COL5A1-201ENST00000371817 SYTL1Q8IYJ3 562 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 AMNQ9BXJ7 453 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 CDH3P22223 829 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 TBXAS1P24557 533 aaPredicted RBP15.96■□□□□ 0.15
COL5A1-201ENST00000371817 ACTR2P61160 394 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 GORASP1Q9BQQ3 440 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 SLC5A4Q9NY91 659 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 GRID1Q9ULK0 1009 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 USP19O94966 1318 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 PCDH11XQ9BZA7 1347 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 KCNF1Q9H3M0 494 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 ZC3H7BQ9UGR2 993 aaKnown RBP15.96■□□□□ 0.15
COL5A1-201ENST00000371817 TRPC5OSA6NMA1 111 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 hCG_1984214I3L0E3 225 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 ZNF197O14709 1029 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 ALAS1P13196 640 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 CDC25AP30304 524 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 NPATQ14207 1427 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 KIAA0408Q6ZU52 694 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 SSH3Q8TE77 659 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 RMND5BQ96G75 393 aaPredicted RBP15.96■□□□□ 0.15
COL5A1-201ENST00000371817 CNPY3Q9BT09 278 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 CCDC28BQ9BUN5 200 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 POLD4Q9HCU8 107 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 INTS13Q9NVM9 706 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 KRT20P35900 424 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 MAPKAPK2P49137 400 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 CHI3L2Q15782 390 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 ZNF618Q5T7W0 954 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 RASGRP4Q8TDF6 673 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 TASP1Q9H6P5 420 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 PRELID1Q9Y255 219 aa15.96■□□□□ 0.15
COL5A1-201ENST00000371817 F5H423 210 aaPredicted RBP15.96■□□□□ 0.14
COL5A1-201ENST00000371817 KCNN4O15554 427 aa15.96■□□□□ 0.14
COL5A1-201ENST00000371817 CYP19A1P11511 503 aaPredicted RBP15.96■□□□□ 0.14
COL5A1-201ENST00000371817 LRPAP1P30533 357 aa15.96■□□□□ 0.14
COL5A1-201ENST00000371817 SLC1A1P43005 524 aa15.96■□□□□ 0.14
COL5A1-201ENST00000371817 DDR2Q16832 855 aa15.96■□□□□ 0.14
COL5A1-201ENST00000371817 KRCC1Q9NPI7 259 aaPredicted RBP15.96■□□□□ 0.14
COL5A1-201ENST00000371817 GDAQ9Y2T3 454 aa15.96■□□□□ 0.14
COL5A1-201ENST00000371817 ARHGEF12Q9NZN5 1544 aa15.96■□□□□ 0.14
COL5A1-201ENST00000371817 ZNF57Q68EA5 555 aaPredicted RBP15.95■□□□□ 0.14
COL5A1-201ENST00000371817 ZNF184Q99676 751 aaPredicted RBP15.95■□□□□ 0.14
COL5A1-201ENST00000371817 EFCAB1Q9HAE3 211 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 AVENQ9NQS1 362 aaPredicted RBP15.95■□□□□ 0.14
COL5A1-201ENST00000371817 HEY2Q9UBP5 337 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 STAP2Q9UGK3 403 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 MYH3P11055 1940 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 RFC5P40937 340 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 MAGEA10P43363 369 aaPredicted RBP15.95■□□□□ 0.14
COL5A1-201ENST00000371817 NCALDP61601 193 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 E4F1Q66K89 784 aaPredicted RBP15.95■□□□□ 0.14
COL5A1-201ENST00000371817 RDM1Q8NG50 284 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 E2F7Q96AV8 911 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 ENTPD7Q9NQZ7 604 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 MYRFQ9Y2G1 1151 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 SH3GLB1Q9Y371 365 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 CDC40O60508 579 aaKnown RBP eCLIP15.95■□□□□ 0.14
COL5A1-201ENST00000371817 CCDC130P13994 396 aa15.95■□□□□ 0.14
COL5A1-201ENST00000371817 WARSP23381 471 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms