RNA–Protein interactions for RNA: ENST00000371242.6

RAE1-201, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAE1, Length 2,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-201ENST00000371242 GTF3C2Q8WUA4 911 aaPredicted RBP11.9□□□□□ -0.51
RAE1-201ENST00000371242 COPS5Q92905 334 aa11.9□□□□□ -0.51
RAE1-201ENST00000371242 MAGOHBQ96A72 148 aaKnown RBP11.9□□□□□ -0.51
RAE1-201ENST00000371242 DPH5Q9H2P9 285 aa11.9□□□□□ -0.51
RAE1-201ENST00000371242 FZD8Q9H461 694 aa11.9□□□□□ -0.51
RAE1-201ENST00000371242 MTUS1Q9ULD2 1270 aa11.9□□□□□ -0.51
RAE1-201ENST00000371242 PLAAQ9Y263 795 aa11.9□□□□□ -0.51
RAE1-201ENST00000371242 MYO1FO00160 1098 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 PODXLO00592 558 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 GJA5P36382 358 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 FLT3P36888 993 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 PTGIRP43119 386 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 ZNF132P52740 706 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 HNRNPH2P55795 449 aaKnown RBP11.89□□□□□ -0.51
RAE1-201ENST00000371242 SMYD5Q6GMV2 418 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 CCDC137Q6PK04 289 aaKnown RBP11.89□□□□□ -0.51
RAE1-201ENST00000371242 MPZL3Q6UWV2 235 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 TMC3Q7Z5M5 1100 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 PHF13Q86YI8 300 aaPredicted RBP11.89□□□□□ -0.51
RAE1-201ENST00000371242 C18orf8Q96DM3 657 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 RUNDC3BQ96NL0 473 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 FMO2Q99518 471 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 PTPRHQ9HD43 1115 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 PDGFCQ9NRA1 345 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 CALCOCO1Q9P1Z2 691 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 PNMA3Q9UL41 463 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 H0YGN5 161 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 ASAP2O43150 1006 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 SIX1Q15475 284 aaPredicted RBP11.89□□□□□ -0.51
RAE1-201ENST00000371242 DUOXA2Q1HG44 320 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 SPDYCQ5MJ68 293 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 TMEM63BQ5T3F8 832 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 LIN9Q5TKA1 542 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 C12orf50Q8NA57 414 aaPredicted RBP11.89□□□□□ -0.51
RAE1-201ENST00000371242 MTMR12Q9C0I1 747 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 EFCC1Q9HA90 598 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 MRPL47Q9HD33 250 aaKnown RBP11.89□□□□□ -0.51
RAE1-201ENST00000371242 ZDHHC18Q9NUE0 388 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 ERAP1Q9NZ08 941 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 NFS1Q9Y697 457 aa11.89□□□□□ -0.51
RAE1-201ENST00000371242 FSCN2O14926 492 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 THAP12O43422 761 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 CFHP08603 1231 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 HOXC6P09630 235 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 GBP1P32455 592 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 FNTAP49354 379 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 SKOR1P84550 965 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 SGSM1Q2NKQ1 1148 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 ATF7IP2Q5U623 682 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 SCARA3Q6AZY7 606 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 EFCAB12Q6NXP0 572 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 TTC27Q6P3X3 843 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 ARMCX2Q7L311 632 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 TRAPPC12Q8WVT3 735 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 ZNF606Q8WXB4 792 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 NFKBIZQ9BYH8 718 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 TRIM31Q9BZY9 425 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 TRIM7Q9C029 511 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 RRAGCQ9HB90 399 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 ADAM22Q9P0K1 906 aa11.88□□□□□ -0.51
RAE1-201ENST00000371242 TCRBV7S2A1N4TA0A589 114 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 A6NNZ2 444 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 PPFIA2O75334 1257 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 RARAP10276 462 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 CYP2C8P10632 490 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 COILP38432 576 aaPredicted RBP11.87□□□□□ -0.51
RAE1-201ENST00000371242 C1QBPQ07021 282 aaKnown RBP11.87□□□□□ -0.51
RAE1-201ENST00000371242 PTP4A2Q12974 167 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 KCTD19Q17RG1 926 aaPredicted RBP11.87□□□□□ -0.51
RAE1-201ENST00000371242 TUBB8Q3ZCM7 444 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 CEP85LQ5SZL2 805 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 EMC10Q5UCC4 262 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 MAP1SQ66K74 1059 aaPredicted RBP11.87□□□□□ -0.51
RAE1-201ENST00000371242 PLEKHA7Q6IQ23 1121 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 PASD1Q8IV76 773 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 NLRP4Q96MN2 994 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 C11orf70Q9BRQ4 267 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 TXLNGYQ9BZA5 131 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 LRRC19Q9H756 370 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.87□□□□□ -0.51
RAE1-201ENST00000371242 SCINQ9Y6U3 715 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 HMGB1P1B2RPK0 211 aaPredicted RBP11.87□□□□□ -0.51
RAE1-201ENST00000371242 INO80B-WBP1J3KQ70 363 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 B4GALT4O60513 344 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 PROSCO94903 275 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 ERLIN2O94905 339 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 GJB1P08034 283 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 MYL6P60660 151 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 CCNA1P78396 465 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 MBTD1Q05BQ5 628 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 POU5F1BQ06416 359 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 ARHGAP1Q07960 439 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 DHX9Q08211 1270 aaKnown RBP11.87□□□□□ -0.51
RAE1-201ENST00000371242 LAMC2Q13753 1193 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 ZNF568Q3ZCX4 644 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 C2CD6Q53TS8 623 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 LRRC31Q6UY01 552 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 GPRC5AQ8NFJ5 357 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 FAM212AQ96EL1 285 aa11.87□□□□□ -0.51
RAE1-201ENST00000371242 SLC10A4Q96EP9 437 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms