RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 N4BP2L2Q92802 583 aaPredicted RBP12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 THAP2Q9H0W7 228 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 GOLPH3Q9H4A6 298 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 RAB6BQ9NRW1 208 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 ERAP1Q9NZ08 941 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 KCNN4O15554 427 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 NME3Q13232 169 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 CELF4Q9BZC1 486 aaKnown RBP12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 ELP3Q9H9T3 547 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 PAK5Q9P286 719 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 DUSP10Q9Y6W6 482 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 FRMD3A2A2Y4 597 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 H0Y3Z8 333 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 FAM107AO95990 144 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 CD4P01730 458 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 APRTP07741 180 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 SSTR3P32745 418 aaPredicted RBP12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 CASP2P42575 452 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 SERPINB9P50453 376 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 KYNUQ16719 465 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 TMC2Q8TDI7 906 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 PABPC3Q9H361 631 aaKnown RBP12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 ECT2Q9H8V3 914 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 SLC8A2Q9UPR5 921 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 ORC6Q9Y5N6 252 aa12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 COL5A2P05997 1499 aaPredicted RBP12.48□□□□□ -0.41
DEPDC1-201ENST00000370966 BAZ2BQ9UIF8 2168 aaKnown RBP12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 RBP3P10745 1247 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 MAGEA4P43358 317 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 KCNJ1P48048 391 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 CASP4P49662 377 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 TBX2Q13207 712 aaPredicted RBP12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 EARS2Q5JPH6 523 aaKnown RBP12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 GPAT2Q6NUI2 795 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 C4orf22Q6V702 233 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 PARP9Q8IXQ6 854 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 OR6J1Q8NGC5 347 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 ACTRT1Q8TDG2 376 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 TRIM15Q9C019 465 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 AKAP3O75969 853 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 APOEP02649 317 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 PLA2G4AP47712 749 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 HERVK_113P62684 666 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 LONRF1Q17RB8 773 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 C1orf146Q5VVC0 180 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 ANKMY2Q8IV38 441 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 URGCPQ8TCY9 931 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 IFT43Q96FT9 208 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 PRMT1Q99873 361 aaKnown RBP12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 KLC4Q9NSK0 619 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 SPATS2LQ9NUQ6 558 aaKnown RBP12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 KLHL11Q9NVR0 708 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 NDE1Q9NXR1 346 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 GGA3Q9NZ52 723 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 TRAF3IP3Q9Y228 551 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 PIN4Q9Y237 131 aaKnown RBP12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 DIAPH2O60879 1101 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 GMPSP49915 693 aaPredicted RBP12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 MORF4L2Q15014 288 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 BTBD8Q5XKL5 378 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 SH3RF1Q7Z6J0 888 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 CCNYL1Q8N7R7 359 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 APPL2Q8NEU8 664 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 OR2W6PQ8NHA6 318 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 ZC3H7BQ9UGR2 993 aaKnown RBP12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 SPDYE2BA6NHP3 402 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 CST8O60676 142 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 SPDYE6P0CI01 402 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 ACADSBP45954 432 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 PRAMEP78395 509 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 CUL2Q13617 745 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 TSTA3Q13630 321 aaPredicted RBP12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 SLC29A2Q14542 456 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 C4orf19Q8IY42 314 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 ST13P4Q8IZP2 240 aaPredicted RBP12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 KIAA0895Q8NCT3 520 aa12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 FAF1Q9UNN5 650 aaPredicted RBP12.47□□□□□ -0.41
DEPDC1-201ENST00000370966 OGTO15294 1046 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 ARP10275 920 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 HSD17B3P37058 310 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 SERPINB4P48594 390 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 SLC12A1Q13621 1099 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 BOLA3Q53S33 107 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 AIPL1Q9NZN9 384 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 ABT1Q9ULW3 272 aaKnown RBP12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 LCP1P13796 627 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 ITGA8P53708 1063 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 TPI1P60174 286 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 TEDDM1Q5T9Z0 273 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 SPATA18Q8TC71 538 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 GIPC2Q8TF65 315 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 KRT35Q92764 455 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 GCNAQ96QF7 691 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 ZBTB18Q99592 522 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 PI4K2AQ9BTU6 479 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 GTSE1Q9NYZ3 720 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 DBR1Q9UK59 544 aaKnown RBP12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 ARHGAP23Q9P227 1491 aa12.46□□□□□ -0.41
DEPDC1-201ENST00000370966 DDTLA6NHG4 134 aaPredicted RBP12.46□□□□□ -0.42
DEPDC1-201ENST00000370966 GSTA4O15217 222 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms