RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 KCNF1Q9H3M0 494 aa9.54□□□□□ -0.88
SNX27-201ENST00000368838 ZHX3Q9H4I2 956 aa9.54□□□□□ -0.88
SNX27-201ENST00000368838 SPTLC3Q9NUV7 552 aa9.54□□□□□ -0.88
SNX27-201ENST00000368838 MUTYHQ9UIF7 546 aa9.54□□□□□ -0.88
SNX27-201ENST00000368838 CD207Q9UJ71 328 aa9.54□□□□□ -0.88
SNX27-201ENST00000368838 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.54□□□□□ -0.88
SNX27-201ENST00000368838 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.54□□□□□ -0.88
SNX27-201ENST00000368838 SQORQ9Y6N5 450 aa9.54□□□□□ -0.88
SNX27-201ENST00000368838 TMEM150BA6NC51 233 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 CCP110O43303 1012 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 N4BP1O75113 896 aaKnown RBP9.53□□□□□ -0.88
SNX27-201ENST00000368838 MFAP3LO75121 409 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 CSDE1O75534 798 aaKnown RBP9.53□□□□□ -0.88
SNX27-201ENST00000368838 GYPCP04921 128 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 MSNP26038 577 aaKnown RBP9.53□□□□□ -0.88
SNX27-201ENST00000368838 ANXA13P27216 316 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 NLRP11P59045 1033 aaKnown RBP9.53□□□□□ -0.88
SNX27-201ENST00000368838 ERVFC1P60507 584 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 ZBED6P86452 979 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 KCNA1Q09470 495 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 SMAD4Q13485 552 aaKnown RBP9.53□□□□□ -0.88
SNX27-201ENST00000368838 TFDP1Q14186 410 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 SMAD2Q15796 467 aaKnown RBP9.53□□□□□ -0.88
SNX27-201ENST00000368838 ZC2HC1CQ53FD0 456 aaPredicted RBP9.53□□□□□ -0.88
SNX27-201ENST00000368838 ZNF662Q6ZS27 426 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 ZNF410Q86VK4 478 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 PPFIBP1Q86W92 1011 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 TMEM139Q8IV31 216 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 ADHFE1Q8IWW8 467 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 NELFCDQ8IXH7 590 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 THNSL1Q8IYQ7 743 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 NME8Q8N427 588 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 BSNDQ8WZ55 320 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 SH2D3AQ9BRG2 576 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 APOL5Q9BWW9 433 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 PLVAPQ9BX97 442 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 CCDC113Q9H0I3 377 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 POLR3FQ9H1D9 316 aaPredicted RBP9.53□□□□□ -0.88
SNX27-201ENST00000368838 VPS16Q9H269 839 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 FZD8Q9H461 694 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 TLE6Q9H808 572 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 GPRC5CQ9NQ84 441 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 RGS18Q9NS28 235 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 TAB2Q9NYJ8 693 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 CLEC1BQ9P126 229 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 LHX6Q9UPM6 363 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 AKT3Q9Y243 479 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 FAM50BQ9Y247 325 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 FRMD4BQ9Y2L6 1034 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 COQ4Q9Y3A0 265 aa9.53□□□□□ -0.88
SNX27-201ENST00000368838 PLXNA3P51805 1871 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 MYH11P35749 1972 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 C9IYK1 514 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 K7ERI5 159 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 SMAPO00193 183 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 ACKR2O00590 384 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 GPR32O75388 356 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 FGF18O76093 207 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 GLP2RO95838 553 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 AFPP02771 609 aaKnown RBP9.52□□□□□ -0.89
SNX27-201ENST00000368838 ALADP13716 330 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 SP100P23497 879 aaPredicted RBP9.52□□□□□ -0.89
SNX27-201ENST00000368838 TMOD1P28289 359 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 ADSSP30520 456 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 CRYBB1P53674 252 aaPredicted RBP9.52□□□□□ -0.89
SNX27-201ENST00000368838 PTENP60484 403 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 KCNH2Q12809 1159 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 KYAT1Q16773 422 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 CCDC40Q4G0X9 1142 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 PLPP4Q5VZY2 271 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 DPY19L2P1Q6NXN4 242 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 EFCAB12Q6NXP0 572 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 SLC24A5Q71RS6 500 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 TAS1R3Q7RTX0 852 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 RNF135Q8IUD6 432 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 TMTC1Q8IUR5 882 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 FAM186BQ8IYM0 893 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 SYCP3Q8IZU3 236 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 COLGALT1Q8NBJ5 622 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 SPC24Q8NBT2 197 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 VN1R2Q8NFZ6 395 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 OR8K1Q8NGG5 319 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 DEPTORQ8TB45 409 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 FAXDC2Q96IV6 333 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 MSLNLQ96KJ4 702 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 MFSD14AQ96MC6 490 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 SCLT1Q96NL6 688 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 LUC7L2Q9Y383 392 aaKnown RBP9.52□□□□□ -0.89
SNX27-201ENST00000368838 PCDHB12Q9Y5F1 795 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 ZDBF2Q9HCK1 2354 aa9.52□□□□□ -0.89
SNX27-201ENST00000368838 TRIP11Q15643 1979 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 A0A0B4J269 797 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 GOLGA6L9A6NEM1 432 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 PRR33A8MZF0 331 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 GPR182O15218 404 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 SLC16A4O15374 487 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 NCK2O43639 380 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 TOM1L1O75674 476 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 SKILP12757 684 aa9.51□□□□□ -0.89
SNX27-201ENST00000368838 PROZP22891 400 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms