RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 TMTC1Q8IUR5 882 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 ARHGEF19Q8IW93 802 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 LRRC52Q8N7C0 313 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 CXorf38Q8TB03 319 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 PI4K2AQ9BTU6 479 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 AIPL1Q9NZN9 384 aa13.24□□□□□ -0.29
TUBE1-202ENST00000368662 MEIS3P2A8K0S8 358 aa13.23□□□□□ -0.29
TUBE1-202ENST00000368662 F8VZ95 297 aa13.23□□□□□ -0.29
TUBE1-202ENST00000368662 PTGESO14684 152 aa13.23□□□□□ -0.29
TUBE1-202ENST00000368662 LRRN2O75325 713 aa13.23□□□□□ -0.29
TUBE1-202ENST00000368662 GRIK3Q13003 919 aa13.23□□□□□ -0.29
TUBE1-202ENST00000368662 DRAP1Q14919 205 aaPredicted RBP13.23□□□□□ -0.29
TUBE1-202ENST00000368662 ZNF667Q5HYK9 610 aa13.23□□□□□ -0.29
TUBE1-202ENST00000368662 GSTCDQ8NEC7 633 aa13.23□□□□□ -0.29
TUBE1-202ENST00000368662 HTATIP2Q9BUP3 242 aa13.23□□□□□ -0.29
TUBE1-202ENST00000368662 NIF3L1Q9GZT8 377 aa13.23□□□□□ -0.29
TUBE1-202ENST00000368662 XYLT2Q9H1B5 865 aa13.23□□□□□ -0.29
TUBE1-202ENST00000368662 CXCL16Q9H2A7 254 aa13.23□□□□□ -0.29
TUBE1-202ENST00000368662 FAM124BQ9H5Z6 455 aaPredicted RBP13.23□□□□□ -0.29
TUBE1-202ENST00000368662 KANSL3Q9P2N6 904 aa13.23□□□□□ -0.29
TUBE1-202ENST00000368662 TUBGCP4Q9UGJ1 667 aa13.23□□□□□ -0.29
TUBE1-202ENST00000368662 AGAP1Q9UPQ3 857 aa13.23□□□□□ -0.29
TUBE1-202ENST00000368662 PCDHB7Q9Y5E2 793 aa13.23□□□□□ -0.29
TUBE1-202ENST00000368662 BZW2Q9Y6E2 419 aaKnown RBP13.23□□□□□ -0.29
TUBE1-202ENST00000368662 ARHGAP6O43182 974 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 SKILP12757 684 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 FERP16591 822 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 LRPAP1P30533 357 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 CUL2Q13617 745 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 ARHGAP44Q17R89 818 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 URGCPQ8TCY9 931 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 TATDN2Q93075 761 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 HPDLQ96IR7 371 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 ZNF560Q96MR9 790 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 KCNF1Q9H3M0 494 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 LRFN2Q9ULH4 789 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 NUB1Q9Y5A7 615 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 TRIP11Q15643 1979 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 PDCD11Q14690 1871 aaKnown RBP13.22□□□□□ -0.29
TUBE1-202ENST00000368662 ABHD14A-ACY1A0A1B0GW23 586 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 ANO9A1A5B4 782 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 OFD1O75665 1012 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 SOX5P35711 763 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 SCNN1GP51170 649 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 YWHAEP62258 255 aaKnown RBP13.22□□□□□ -0.29
TUBE1-202ENST00000368662 CCZ1BP86790 482 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 CCZ1P86791 482 aaPredicted RBP13.22□□□□□ -0.29
TUBE1-202ENST00000368662 ASIC2Q16515 512 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 WDR72Q3MJ13 1102 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 C9orf57Q5W0N0 161 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 SPOPLQ6IQ16 392 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 ABI1Q8IZP0 508 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 SHC3Q92529 594 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 C18orf25Q96B23 403 aaPredicted RBP13.22□□□□□ -0.29
TUBE1-202ENST00000368662 APOBEC3GQ9HC16 384 aaKnown RBP13.22□□□□□ -0.29
TUBE1-202ENST00000368662 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.22□□□□□ -0.29
TUBE1-202ENST00000368662 TET1Q8NFU7 2136 aa13.22□□□□□ -0.29
TUBE1-202ENST00000368662 SCN5AQ14524 2016 aa13.21□□□□□ -0.29
TUBE1-202ENST00000368662 PIRO00625 290 aa13.21□□□□□ -0.29
TUBE1-202ENST00000368662 SERPING1P05155 500 aa13.21□□□□□ -0.29
TUBE1-202ENST00000368662 IBSPP21815 317 aaPredicted RBP13.21□□□□□ -0.29
TUBE1-202ENST00000368662 RPL9P32969 192 aaKnown RBP13.21□□□□□ -0.29
TUBE1-202ENST00000368662 GUCY2FP51841 1108 aa13.21□□□□□ -0.29
TUBE1-202ENST00000368662 WDR59Q6PJI9 974 aa13.21□□□□□ -0.29
TUBE1-202ENST00000368662 NPAS4Q8IUM7 802 aa13.21□□□□□ -0.29
TUBE1-202ENST00000368662 TMEM139Q8IV31 216 aa13.21□□□□□ -0.29
TUBE1-202ENST00000368662 TTC39CQ8N584 583 aa13.21□□□□□ -0.29
TUBE1-202ENST00000368662 KREMEN1Q96MU8 473 aa13.21□□□□□ -0.29
TUBE1-202ENST00000368662 UROC1Q96N76 676 aa13.21□□□□□ -0.29
TUBE1-202ENST00000368662 ZNF830Q96NB3 372 aaPredicted RBP13.21□□□□□ -0.29
TUBE1-202ENST00000368662 GPR88Q9GZN0 384 aa13.21□□□□□ -0.29
TUBE1-202ENST00000368662 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.21□□□□□ -0.29
TUBE1-202ENST00000368662 AJAP1Q9UKB5 411 aaPredicted RBP13.21□□□□□ -0.29
TUBE1-202ENST00000368662 CSF2RAP15509 400 aa13.21□□□□□ -0.3
TUBE1-202ENST00000368662 PAX3P23760 479 aa13.21□□□□□ -0.3
TUBE1-202ENST00000368662 ITGB8P26012 769 aa13.21□□□□□ -0.3
TUBE1-202ENST00000368662 TNNC1P63316 161 aa13.21□□□□□ -0.3
TUBE1-202ENST00000368662 NAB2Q15742 525 aa13.21□□□□□ -0.3
TUBE1-202ENST00000368662 NOMO2Q5JPE7 1267 aa13.21□□□□□ -0.3
TUBE1-202ENST00000368662 DDX27Q96GQ7 796 aaKnown RBP13.21□□□□□ -0.3
TUBE1-202ENST00000368662 CYP3A43Q9HB55 503 aa13.21□□□□□ -0.3
TUBE1-202ENST00000368662 INPP5FQ9Y2H2 1132 aa13.21□□□□□ -0.3
TUBE1-202ENST00000368662 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.2□□□□□ -0.3
TUBE1-202ENST00000368662 SSU72P8A0A1W2PR75 194 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 FOXN3O00409 490 aaPredicted RBP13.2□□□□□ -0.3
TUBE1-202ENST00000368662 BAIAP3O94812 1187 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 PRKCIP41743 596 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 KCNJ6P48051 423 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 TAF6P49848 677 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 SOX4Q06945 474 aaPredicted RBP13.2□□□□□ -0.3
TUBE1-202ENST00000368662 KLHL30Q0D2K2 578 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 PPIGQ13427 754 aaKnown RBP eCLIP13.2□□□□□ -0.3
TUBE1-202ENST00000368662 TUSC3Q13454 348 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 TCTN1Q2MV58 587 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 SV2CQ496J9 727 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 FAM71AQ8IYT1 594 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 CCDC170Q8IYT3 715 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 CRIPAKQ8N1N5 446 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 KAT5Q92993 513 aa13.2□□□□□ -0.3
TUBE1-202ENST00000368662 MRPL9Q9BYD2 267 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms