RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 HS2ST1Q7LGA3 356 aa24.31■■□□□ 1.48
ECHDC1-203ENST00000368291 PPFIBP1Q86W92 1011 aa24.31■■□□□ 1.48
ECHDC1-203ENST00000368291 SPATA20Q8TB22 786 aa24.31■■□□□ 1.48
ECHDC1-203ENST00000368291 NOC3LQ8WTT2 800 aaKnown RBP24.31■■□□□ 1.48
ECHDC1-203ENST00000368291 ERCC4Q92889 916 aaPredicted RBP24.31■■□□□ 1.48
ECHDC1-203ENST00000368291 CCDC34Q96HJ3 373 aa24.31■■□□□ 1.48
ECHDC1-203ENST00000368291 CLSTN3Q9BQT9 956 aa24.31■■□□□ 1.48
ECHDC1-203ENST00000368291 COL25A1Q9BXS0 654 aaPredicted RBP24.31■■□□□ 1.48
ECHDC1-203ENST00000368291 PDE11AQ9HCR9 933 aa24.31■■□□□ 1.48
ECHDC1-203ENST00000368291 CGNQ9P2M7 1197 aaKnown RBP24.31■■□□□ 1.48
ECHDC1-203ENST00000368291 NUB1Q9Y5A7 615 aa24.31■■□□□ 1.48
ECHDC1-203ENST00000368291 PIRO00625 290 aa24.3■■□□□ 1.48
ECHDC1-203ENST00000368291 ADH1AP07327 375 aa24.3■■□□□ 1.48
ECHDC1-203ENST00000368291 SMAD4Q13485 552 aaKnown RBP24.3■■□□□ 1.48
ECHDC1-203ENST00000368291 PSMD5Q16401 504 aa24.3■■□□□ 1.48
ECHDC1-203ENST00000368291 NT5DC4Q86YG4 428 aa24.3■■□□□ 1.48
ECHDC1-203ENST00000368291 CCDC47Q96A33 483 aaKnown RBP24.3■■□□□ 1.48
ECHDC1-203ENST00000368291 FAM84AQ96KN4 292 aa24.3■■□□□ 1.48
ECHDC1-203ENST00000368291 IPO9Q96P70 1041 aaKnown RBP24.3■■□□□ 1.48
ECHDC1-203ENST00000368291 ZNF233A6NK53 670 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 ADAM12O43184 909 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 SRGAP2BP0DMP2 458 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 MCM4P33991 863 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 CYP2J2P51589 502 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 PUS10Q3MIT2 529 aaKnown RBP24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 SCARA3Q6AZY7 606 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 RSPO2Q6UXX9 243 aaPredicted RBP24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 CLEC17AQ6ZS10 378 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 GLYCTKQ8IVS8 523 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 ELOA2Q8IYF1 753 aaPredicted RBP24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 XXYLT1Q8NBI6 393 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 RDH13Q8NBN7 331 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 FEZF2Q8TBJ5 459 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 KIAA1586Q9HCI6 787 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 DPP3Q9NY33 737 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 MTRRQ9UBK8 725 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 PCDHA5Q9Y5H7 936 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 M0QZQ0 153 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 SYN3O14994 580 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 SPTLC1O15269 473 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 HOXB8P17481 243 aaPredicted RBP24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 LILRA6Q6PI73 481 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 CXorf38Q8TB03 319 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 ADAMTS19Q8TE59 1207 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 TMEM174Q8WUU8 243 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 NECAB3Q96P71 396 aaPredicted RBP24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 DMAC2Q9NW81 257 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 MAPK8IP1Q9UQF2 711 aa24.29■■□□□ 1.48
ECHDC1-203ENST00000368291 PTPRJQ12913 1337 aa24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 PDXKO00764 312 aa24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 LILRA4P59901 499 aa24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 UBE2HP62256 183 aa24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 CREMQ03060 361 aa24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 MRPL58Q14197 206 aaKnown RBP24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 SMAD2Q15796 467 aaKnown RBP24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 SNRNP35Q16560 246 aaKnown RBP24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 VARS2Q5ST30 1063 aaKnown RBP24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 PDXDC1Q6P996 788 aa24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 PALB2Q86YC2 1186 aa24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 GUF1Q8N442 669 aaKnown RBP24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 C12orf76Q8N812 135 aaPredicted RBP24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 DOCK6Q96HP0 2047 aa24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 GSDMAQ96QA5 445 aa24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 APOL5Q9BWW9 433 aa24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 USP15Q9Y4E8 981 aaPredicted RBP24.28■■□□□ 1.48
ECHDC1-203ENST00000368291 TGM5O43548 720 aa24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 TBC1D4O60343 1298 aa24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 KINO60870 393 aaKnown RBP24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 GLUD1P00367 558 aa24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 C1RP00736 705 aa24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 TFAMQ00059 246 aaKnown RBP24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 LMBRD2Q68DH5 695 aaPredicted RBP24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 ANKS3Q6ZW76 656 aa24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 SMYD4Q8IYR2 804 aaPredicted RBP24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 C1orf127Q8N9H9 656 aa24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 GOLGA5Q8TBA6 731 aa24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 SUSD6Q92537 303 aa24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 GZF1Q9H116 711 aaPredicted RBP24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 DZANK1Q9NVP4 752 aa24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 CDH22Q9UJ99 828 aa24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 PCDHB8Q9UN66 801 aa24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 TRAF3IP3Q9Y228 551 aa24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 BACE2Q9Y5Z0 518 aa24.27■■□□□ 1.48
ECHDC1-203ENST00000368291 NCOR1O75376 2440 aa24.26■■□□□ 1.47
ECHDC1-203ENST00000368291 DENND4AQ7Z401 1863 aa24.26■■□□□ 1.47
ECHDC1-203ENST00000368291 PRPF40AO75400 957 aaKnown RBP24.26■■□□□ 1.47
ECHDC1-203ENST00000368291 SPATA31D3P0C874 917 aa24.26■■□□□ 1.47
ECHDC1-203ENST00000368291 CYP24A1Q07973 514 aa24.26■■□□□ 1.47
ECHDC1-203ENST00000368291 SPATA31D4Q6ZUB0 917 aa24.26■■□□□ 1.47
ECHDC1-203ENST00000368291 SLC9A9Q8IVB4 645 aa24.26■■□□□ 1.47
ECHDC1-203ENST00000368291 BORCS6Q96GS4 357 aa24.26■■□□□ 1.47
ECHDC1-203ENST00000368291 MAN1C1Q9NR34 630 aa24.26■■□□□ 1.47
ECHDC1-203ENST00000368291 OR1D2P34982 312 aa24.25■■□□□ 1.47
ECHDC1-203ENST00000368291 SURF1Q15526 300 aa24.25■■□□□ 1.47
ECHDC1-203ENST00000368291 OR5B17Q8NGF7 314 aa24.25■■□□□ 1.47
ECHDC1-203ENST00000368291 SMARCE1Q969G3 411 aa24.25■■□□□ 1.47
ECHDC1-203ENST00000368291 MFSD14AQ96MC6 490 aa24.25■■□□□ 1.47
ECHDC1-203ENST00000368291 MTMR12Q9C0I1 747 aa24.25■■□□□ 1.47
ECHDC1-203ENST00000368291 ADAM7Q9H2U9 754 aa24.25■■□□□ 1.47
ECHDC1-203ENST00000368291 INTS13Q9NVM9 706 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms