RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 KCNH7Q9NS40 1196 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 AGTPBP1Q9UPW5 1226 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 USH1CQ9Y6N9 552 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 TLR3O15455 904 aaKnown RBP8.68□□□□□ -1.02
CD46-208ENST00000367042 KRT1P04264 644 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 RPA3P35244 121 aaPredicted RBP8.68□□□□□ -1.02
CD46-208ENST00000367042 RASSF2P50749 326 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 POLGP54098 1239 aaPredicted RBP8.68□□□□□ -1.02
CD46-208ENST00000367042 JAG1P78504 1218 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 PDIA2Q13087 525 aaKnown RBP8.68□□□□□ -1.02
CD46-208ENST00000367042 FASTKD3Q14CZ7 662 aaKnown RBP8.68□□□□□ -1.02
CD46-208ENST00000367042 SIX1Q15475 284 aaPredicted RBP8.68□□□□□ -1.02
CD46-208ENST00000367042 SLC15A2Q16348 729 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 FAM182AQ5T1J6 154 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 LVRNQ6Q4G3 990 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 TMEM270Q6UE05 265 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 HHIPL2Q6UWX4 724 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 SH3BP5LQ7L8J4 393 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 TTC8Q8TAM2 541 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 MKL1Q969V6 931 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 AGBL1Q96MI9 1066 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 C10orf88Q9H8K7 445 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 METTL5Q9NRN9 209 aaKnown RBP8.68□□□□□ -1.02
CD46-208ENST00000367042 EXOC7Q9UPT5 735 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 PCDHB4Q9Y5E5 795 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 MAST2Q6P0Q8 1798 aa8.68□□□□□ -1.02
CD46-208ENST00000367042 UBE4BO95155 1302 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 BRWD3Q6RI45 1802 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 FSCN2O14926 492 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 DCTN3O75935 186 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 CYP1A2P05177 515 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 KRT4P19013 534 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 PIK3CAP42336 1068 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 PSMC4P43686 418 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 QARSP47897 775 aaKnown RBP8.67□□□□□ -1.02
CD46-208ENST00000367042 WDR4P57081 412 aaKnown RBP8.67□□□□□ -1.02
CD46-208ENST00000367042 SV2AQ7L0J3 742 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 MTDHQ86UE4 582 aaKnown RBP8.67□□□□□ -1.02
CD46-208ENST00000367042 LDHDQ86WU2 507 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 SP8Q8IXZ3 490 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 CERKQ8TCT0 537 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 VTI1AQ96AJ9 217 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 FHDC1Q9C0D6 1143 aaPredicted RBP8.67□□□□□ -1.02
CD46-208ENST00000367042 IKBKGQ9Y6K9 419 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 LRRD1A4D1F6 860 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 TROVE2P10155 538 aaKnown RBP eCLIP8.67□□□□□ -1.02
CD46-208ENST00000367042 RARRES1P49788 294 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 CAV1Q03135 178 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 TRAF1Q13077 416 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 PTK6Q13882 451 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 CYP1B1Q16678 543 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 MIS18BP1Q6P0N0 1132 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 RHOT1Q8IXI2 618 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 BBOF1Q8ND07 529 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 CHURC1Q8WUH1 139 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 SHC3Q92529 594 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 CD101Q93033 1021 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 STMN2Q93045 179 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 GRAMD1AQ96CP6 724 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 GMCL1Q96IK5 515 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 TBC1D10AQ9BXI6 508 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 SLC5A4Q9NY91 659 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 SMCHD1A6NHR9 2005 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 ATP8B3O60423 1300 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 A0A1W2PPM1 405 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 CTCFP49711 727 aaPredicted RBP8.67□□□□□ -1.02
CD46-208ENST00000367042 MTMR1Q13613 665 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 BRDTQ58F21 947 aaPredicted RBP8.67□□□□□ -1.02
CD46-208ENST00000367042 CGB2Q6NT52 195 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 GLIS1Q8NBF1 620 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 CEP170P1Q96L14 293 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.67□□□□□ -1.02
CD46-208ENST00000367042 ANKFY1Q9P2R3 1169 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 DNPEPQ9ULA0 475 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 CHKBQ9Y259 395 aa8.67□□□□□ -1.02
CD46-208ENST00000367042 P4HA2O15460 535 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 OAS1P00973 400 aaKnown RBP8.66□□□□□ -1.02
CD46-208ENST00000367042 PECAM1P16284 738 aaPredicted RBP8.66□□□□□ -1.02
CD46-208ENST00000367042 ITGB5P18084 799 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 CPA2P48052 419 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 ACOT2P49753 483 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 HADHBP55084 474 aaKnown RBP8.66□□□□□ -1.02
CD46-208ENST00000367042 TAS2R40P59535 323 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 CLEC16AQ2KHT3 1053 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 BBS9Q3SYG4 887 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 GALNTL6Q49A17 601 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 CRY2Q49AN0 593 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 THEMIS2Q5TEJ8 643 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 ZC3H18Q86VM9 953 aaKnown RBP8.66□□□□□ -1.02
CD46-208ENST00000367042 CCDC125Q86Z20 511 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 MCOLN2Q8IZK6 566 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 FAM13CQ8NE31 585 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 SPDYE1Q8NFV5 336 aaPredicted RBP8.66□□□□□ -1.02
CD46-208ENST00000367042 IL31RAQ8NI17 732 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 PARD3BQ8TEW8 1205 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 PSPC1Q8WXF1 523 aaKnown RBP8.66□□□□□ -1.02
CD46-208ENST00000367042 TTC17Q96AE7 1141 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 IWS1Q96ST2 819 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 TMEM121Q9BTD3 319 aa8.66□□□□□ -1.02
CD46-208ENST00000367042 KIAA1586Q9HCI6 787 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms