RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 CT47A1Q5JQC4 288 aaPredicted RBP16.73■□□□□ 0.27
PRKN-203ENST00000366894 ELMSAN1Q6PJG2 1045 aa16.73■□□□□ 0.27
PRKN-203ENST00000366894 TAS1R1Q7RTX1 841 aa16.73■□□□□ 0.27
PRKN-203ENST00000366894 KIAA0895Q8NCT3 520 aa16.73■□□□□ 0.27
PRKN-203ENST00000366894 CDCA3Q99618 268 aaPredicted RBP16.73■□□□□ 0.27
PRKN-203ENST00000366894 PCIF1Q9H4Z3 704 aa16.73■□□□□ 0.27
PRKN-203ENST00000366894 ADAM28Q9UKQ2 775 aa16.73■□□□□ 0.27
PRKN-203ENST00000366894 BARX2Q9UMQ3 279 aaPredicted RBP16.73■□□□□ 0.27
PRKN-203ENST00000366894 NUB1Q9Y5A7 615 aa16.73■□□□□ 0.27
PRKN-203ENST00000366894 IRAK3Q9Y616 596 aa16.73■□□□□ 0.27
PRKN-203ENST00000366894 SF3B1O75533 1304 aaKnown RBP eCLIP16.72■□□□□ 0.27
PRKN-203ENST00000366894 C5orf42Q9H799 3197 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 TMEM189-UBE2V1I3L0A0 370 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 TULP1O00294 542 aaPredicted RBP16.72■□□□□ 0.27
PRKN-203ENST00000366894 CETN3O15182 167 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 CLASP2O75122 1294 aaKnown RBP16.72■□□□□ 0.27
PRKN-203ENST00000366894 B3GAT3O94766 335 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 PNPLA4P41247 253 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 NDUFV1P49821 464 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 FKBP3Q00688 224 aaKnown RBP16.72■□□□□ 0.27
PRKN-203ENST00000366894 ENPEPQ07075 957 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 ADAM9Q13443 819 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 PTPN14Q15678 1187 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 CLUL1Q15846 466 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 SNRNP35Q16560 246 aaKnown RBP16.72■□□□□ 0.27
PRKN-203ENST00000366894 DUOXA2Q1HG44 320 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 USP41Q3LFD5 358 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 FOXR2Q6PJQ5 311 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 TMEM184AQ6ZMB5 413 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 BRSK2Q8IWQ3 736 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 ANKRD36BP1Q96IX9 119 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 CBWD1Q9BRT8 395 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 EMILIN2Q9BXX0 1053 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 OXCT2Q9BYC2 517 aaPredicted RBP16.72■□□□□ 0.27
PRKN-203ENST00000366894 CLSTN2Q9H4D0 955 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.72■□□□□ 0.27
PRKN-203ENST00000366894 MRPL17Q9NRX2 175 aaKnown RBP16.72■□□□□ 0.27
PRKN-203ENST00000366894 MUTYHQ9UIF7 546 aa16.72■□□□□ 0.27
PRKN-203ENST00000366894 TRIOO75962 3097 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 TRIP11Q15643 1979 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 CLIC2O15247 247 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 FAM189A1O60320 539 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 LETM1O95202 739 aaPredicted RBP16.71■□□□□ 0.27
PRKN-203ENST00000366894 C1RP00736 705 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 TNNC2P02585 160 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 KRT13P13646 458 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 IGFBP6P24592 240 aaPredicted RBP16.71■□□□□ 0.27
PRKN-203ENST00000366894 HOXD13P35453 343 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 TNFSF9P41273 254 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 SMAD4Q13485 552 aaKnown RBP16.71■□□□□ 0.27
PRKN-203ENST00000366894 CAMK4Q16566 473 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 UPP1Q16831 310 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 SKOR2Q2VWA4 1001 aaPredicted RBP16.71■□□□□ 0.27
PRKN-203ENST00000366894 SEZ6Q53EL9 994 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 GLRA4Q5JXX5 417 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 SPATA1Q5VX52 437 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 PPFIBP1Q86W92 1011 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 MLKLQ8NB16 471 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 HERC2P3Q9BVR0 1158 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 FGFBP2Q9BYJ0 223 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 GPR62Q9BZJ7 368 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 KCTD10Q9H3F6 313 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 CD207Q9UJ71 328 aa16.71■□□□□ 0.27
PRKN-203ENST00000366894 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.7■□□□□ 0.26
PRKN-203ENST00000366894 CASTOR2A6NHX0 329 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 MBTPS2O43462 519 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 STX10O60499 249 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 NR3C1P04150 777 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 SOD2P04179 222 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 URODP06132 367 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 TMEM191BP0C7N4 346 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 PRKCSHP14314 528 aaPredicted RBP16.7■□□□□ 0.26
PRKN-203ENST00000366894 TNNI1P19237 187 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 LRPAP1P30533 357 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 MCM4P33991 863 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 PSMC2P35998 433 aaKnown RBP16.7■□□□□ 0.26
PRKN-203ENST00000366894 PRCPP42785 496 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 CYP2J2P51589 502 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 ZBTB6Q15916 424 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 CENPPQ6IPU0 288 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 RDH13Q8NBN7 331 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 SMRP1Q8NCR6 262 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 GLIS3Q8NEA6 775 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 APPL2Q8NEU8 664 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 SAAL1Q96ER3 474 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 ZMAT2Q96NC0 199 aaKnown RBP16.7■□□□□ 0.26
PRKN-203ENST00000366894 IKZF4Q9H2S9 585 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 DMAC2Q9NW81 257 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 MAN1B1Q9UKM7 699 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 MAPK8IP1Q9UQF2 711 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 HCFC2Q9Y5Z7 792 aa16.7■□□□□ 0.26
PRKN-203ENST00000366894 CITO14578 2027 aa16.69■□□□□ 0.26
PRKN-203ENST00000366894 PODXLO00592 558 aa16.69■□□□□ 0.26
PRKN-203ENST00000366894 IKBKBO14920 756 aa16.69■□□□□ 0.26
PRKN-203ENST00000366894 KIF4AO95239 1232 aa16.69■□□□□ 0.26
PRKN-203ENST00000366894 NR2F2P24468 414 aa16.69■□□□□ 0.26
PRKN-203ENST00000366894 CCNE1P24864 410 aa16.69■□□□□ 0.26
PRKN-203ENST00000366894 CA8P35219 290 aa16.69■□□□□ 0.26
PRKN-203ENST00000366894 CLCNKBP51801 687 aa16.69■□□□□ 0.26
PRKN-203ENST00000366894 RBP5P82980 135 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms