RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 KLF6Q99612 283 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 ATP8A2Q9NTI2 1148 aa11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 SPATA31E1Q6ZUB1 1445 aa11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 PSMD11O00231 422 aa11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 O00370 1275 aa11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 ENTPD5O75356 428 aa11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 S100A1P23297 94 aa11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 CCDC60Q8IWA6 550 aaPredicted RBP11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 SIRT2Q8IXJ6 389 aa11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 NDST4Q9H3R1 872 aa11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 OR52Z1P0C646 297 aa11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 FCHO2Q0JRZ9 810 aa11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 AKAP4Q5JQC9 854 aa11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 DCPSQ96C86 337 aaKnown RBP11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 FAF2Q96CS3 445 aa11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 EGFL8Q99944 293 aa11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 FSD1LQ9BXM9 530 aa11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 MRPS26Q9BYN8 205 aaKnown RBP11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 KIAA1024Q9UPX6 916 aa11.6□□□□□ -0.55
CDC42BPA-205ENST00000366769 QRICH2Q9H0J4 1663 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 MED23Q9ULK4 1368 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 ARHGEF37A1IGU5 675 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 SNTNA6NMZ2 147 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 E5RI56 91 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 APOA4P06727 396 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 ENO3P13929 434 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 CCNFP41002 786 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 POLD3Q15054 466 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 CCDC157Q569K6 752 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 PPM1NQ8N819 430 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 TEKT3Q9BXF9 490 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 IL12RB1P42701 662 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 IREB2P48200 963 aaKnown RBP11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 MAP3K10Q02779 954 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 PDIK1LQ8N165 341 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 KLHL31Q9H511 634 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 RNPEPL1Q9HAU8 725 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 PCDHA1Q9Y5I3 950 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 RGS2P41220 211 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 PPP2R3CQ969Q6 453 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 SULT1C3Q6IMI6 304 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 SYTL1Q8IYJ3 562 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 IFT43Q96FT9 208 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 CHID1Q9BWS9 393 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 KIAA1683Q9H0B3 1180 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 TOR3AQ9H497 397 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 KRT37O76014 449 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 CALB2P22676 271 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 COPAP53621 1224 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 SH3D19Q5HYK7 790 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 MIGA2Q7L4E1 593 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 NGRNQ9NPE2 291 aaKnown RBP11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 NUP160Q12769 1436 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 SAC3D1A6NKF1 404 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 SP100P23497 879 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 SPATA5Q8NB90 893 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 VPS39Q96JC1 886 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 RANBP17Q9H2T7 1088 aaKnown RBP11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 MYO1GB0I1T2 1018 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 ASAP2O43150 1006 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 PWP1Q13610 501 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 ARL13BQ3SXY8 428 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 ZNF746Q6NUN9 644 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 DRAXINQ8NBI3 349 aaPredicted RBP11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 ANKRD49Q8WVL7 239 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 VMP1Q96GC9 406 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 KMT5AQ9NQR1 393 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 CACNA2D2Q9NY47 1150 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 ADGRA3Q8IWK6 1321 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 MAP2K7O14733 419 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 SLC26A4O43511 780 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 TRAPPC3O43617 180 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 ALOX12P18054 663 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 MEI1Q5TIA1 1274 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 ARHGEF40Q8TER5 1519 aa11.59□□□□□ -0.55
CDC42BPA-205ENST00000366769 MED7O43513 233 aa11.58□□□□□ -0.55
CDC42BPA-205ENST00000366769 GSCP56915 257 aaPredicted RBP11.58□□□□□ -0.55
CDC42BPA-205ENST00000366769 MTM1Q13496 603 aa11.58□□□□□ -0.55
CDC42BPA-205ENST00000366769 BLIDQ8IZY5 108 aa11.58□□□□□ -0.55
CDC42BPA-205ENST00000366769 UBE2TQ9NPD8 197 aaPredicted RBP11.58□□□□□ -0.55
CDC42BPA-205ENST00000366769 TRPV5Q9NQA5 729 aa11.58□□□□□ -0.55
CDC42BPA-205ENST00000366769 RRN3Q9NYV6 651 aa11.58□□□□□ -0.55
CDC42BPA-205ENST00000366769 TRAPPC8Q9Y2L5 1435 aa11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 RAD51BO15315 384 aa11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 SERPINB2P05120 415 aa11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 RAD23AP54725 363 aa11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 CERKLQ49MI3 558 aaPredicted RBP11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 KCNV1Q6PIU1 500 aa11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 TRIM65Q6PJ69 517 aa11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 AFG1LQ8WV93 481 aa11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 CDHR1Q96JP9 859 aa11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 CLIC2O15247 247 aa11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 ATAD3BQ5T9A4 648 aa11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 C16orf89Q6UX73 402 aa11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 SCN4BQ8IWT1 228 aa11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 RASGRP4Q8TDF6 673 aa11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 PCMTD2Q9NV79 361 aa11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 NDUFA13Q9P0J0 144 aa11.58□□□□□ -0.56
CDC42BPA-205ENST00000366769 ABT1Q9ULW3 272 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms