RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 CYFIP2Q96F07 1278 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 TRIM51Q9BSJ1 452 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 PCDHB4Q9Y5E5 795 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 MYO1FO00160 1098 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 CST3P01034 146 aaPredicted RBP24.13■■□□□ 1.45
LDB1-201ENST00000361198 CYP1A1P04798 512 aaPredicted RBP24.13■■□□□ 1.45
LDB1-201ENST00000361198 CLUL1Q15846 466 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 MAPK6Q16659 721 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 C2CD6Q53TS8 623 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 SPDYCQ5MJ68 293 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 LDLRAD1Q5T700 205 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 ZBTB8OSQ8IWT0 167 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 ZDHHC14Q8IZN3 488 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 SLC12A6Q9UHW9 1150 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 PCDHA3Q9Y5H8 950 aa24.13■■□□□ 1.45
LDB1-201ENST00000361198 ABLIM1O14639 778 aa24.12■■□□□ 1.45
LDB1-201ENST00000361198 RRM1P23921 792 aa24.12■■□□□ 1.45
LDB1-201ENST00000361198 SNAPC2Q13487 334 aa24.12■■□□□ 1.45
LDB1-201ENST00000361198 AGBL2Q5U5Z8 902 aa24.12■■□□□ 1.45
LDB1-201ENST00000361198 PHLDB2Q86SQ0 1253 aa24.12■■□□□ 1.45
LDB1-201ENST00000361198 TRIM7Q9C029 511 aa24.12■■□□□ 1.45
LDB1-201ENST00000361198 EVPLQ92817 2033 aa24.12■■□□□ 1.45
LDB1-201ENST00000361198 CENPCQ03188 943 aa24.12■■□□□ 1.45
LDB1-201ENST00000361198 LLGL2Q6P1M3 1020 aa24.12■■□□□ 1.45
LDB1-201ENST00000361198 EXOC8Q8IYI6 725 aa24.12■■□□□ 1.45
LDB1-201ENST00000361198 TXLNGYQ9BZA5 131 aa24.12■■□□□ 1.45
LDB1-201ENST00000361198 RAB17Q9H0T7 212 aa24.12■■□□□ 1.45
LDB1-201ENST00000361198 DPH5Q9H2P9 285 aa24.12■■□□□ 1.45
LDB1-201ENST00000361198 SMARCAD1Q9H4L7 1026 aa24.12■■□□□ 1.45
LDB1-201ENST00000361198 ANAPC7Q9UJX3 599 aa24.12■■□□□ 1.45
LDB1-201ENST00000361198 TBXAS1P24557 533 aaPredicted RBP24.11■■□□□ 1.45
LDB1-201ENST00000361198 CTNNA2P26232 953 aa24.11■■□□□ 1.45
LDB1-201ENST00000361198 DR1Q01658 176 aa24.11■■□□□ 1.45
LDB1-201ENST00000361198 TTLL4Q14679 1199 aa24.11■■□□□ 1.45
LDB1-201ENST00000361198 SEL1L2Q5TEA6 688 aa24.11■■□□□ 1.45
LDB1-201ENST00000361198 WDR49Q8IV35 697 aa24.11■■□□□ 1.45
LDB1-201ENST00000361198 MYCBPAPQ8TBZ2 947 aa24.11■■□□□ 1.45
LDB1-201ENST00000361198 UBLCP1Q8WVY7 318 aaPredicted RBP24.11■■□□□ 1.45
LDB1-201ENST00000361198 FAM212AQ96EL1 285 aa24.11■■□□□ 1.45
LDB1-201ENST00000361198 CCT8L2Q96SF2 557 aa24.11■■□□□ 1.45
LDB1-201ENST00000361198 GGA2Q9UJY4 613 aa24.11■■□□□ 1.45
LDB1-201ENST00000361198 OGTO15294 1046 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 FAM107AO95990 144 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 GNA15P30679 374 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 SSTR3P32745 418 aaPredicted RBP24.1■■□□□ 1.45
LDB1-201ENST00000361198 NSFP46459 744 aaKnown RBP24.1■■□□□ 1.45
LDB1-201ENST00000361198 MCL1Q07820 350 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 NLRP14Q86W24 1093 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 PRELID2Q8N945 189 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 RBBP8NLQ8NC74 664 aaPredicted RBP24.1■■□□□ 1.45
LDB1-201ENST00000361198 ZNF473Q8WTR7 871 aaKnown RBP24.1■■□□□ 1.45
LDB1-201ENST00000361198 NLRP4Q96MN2 994 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 TRIM31Q9BZY9 425 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 MTMR12Q9C0I1 747 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 AVENQ9NQS1 362 aaPredicted RBP24.1■■□□□ 1.45
LDB1-201ENST00000361198 CNTN6Q9UQ52 1028 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 MROH7Q68CQ1 1323 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 PPFIA2O75334 1257 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 MAPK4P31152 587 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 SLC26A2P50443 739 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 DUPD1Q68J44 220 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 ARMCX2Q7L311 632 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 YTHDF3Q7Z739 585 aaKnown RBP24.1■■□□□ 1.45
LDB1-201ENST00000361198 PASD1Q8IV76 773 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 SHCBP1Q8NEM2 672 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 C2orf40Q9H1Z8 148 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 RNPEPQ9H4A4 650 aa24.1■■□□□ 1.45
LDB1-201ENST00000361198 CPSF3Q9UKF6 684 aaKnown RBP24.1■■□□□ 1.45
LDB1-201ENST00000361198 ERLIN2O94905 339 aa24.09■■□□□ 1.45
LDB1-201ENST00000361198 CLCN3P51790 818 aa24.09■■□□□ 1.45
LDB1-201ENST00000361198 DHX9Q08211 1270 aaKnown RBP24.09■■□□□ 1.45
LDB1-201ENST00000361198 GJC2Q5T442 439 aaPredicted RBP24.09■■□□□ 1.45
LDB1-201ENST00000361198 EFCAB12Q6NXP0 572 aa24.09■■□□□ 1.45
LDB1-201ENST00000361198 MICALL1Q8N3F8 863 aa24.09■■□□□ 1.45
LDB1-201ENST00000361198 C18orf8Q96DM3 657 aa24.09■■□□□ 1.45
LDB1-201ENST00000361198 SLC10A4Q96EP9 437 aa24.09■■□□□ 1.45
LDB1-201ENST00000361198 TCRBV7S2A1N4TA0A589 114 aa24.09■■□□□ 1.45
LDB1-201ENST00000361198 ASB14A6NK59 587 aa24.09■■□□□ 1.45
LDB1-201ENST00000361198 MEFVO15553 781 aaPredicted RBP24.09■■□□□ 1.45
LDB1-201ENST00000361198 HBP1O60381 514 aa24.09■■□□□ 1.45
LDB1-201ENST00000361198 PHF2O75151 1096 aa24.09■■□□□ 1.45
LDB1-201ENST00000361198 ASS1P00966 412 aaKnown RBP24.09■■□□□ 1.45
LDB1-201ENST00000361198 HSPA6P17066 643 aa24.09■■□□□ 1.45
LDB1-201ENST00000361198 HPDP32754 393 aaPredicted RBP24.09■■□□□ 1.45
LDB1-201ENST00000361198 SEC24CP53992 1094 aa24.09■■□□□ 1.45
LDB1-201ENST00000361198 MON1BQ7L1V2 547 aa24.09■■□□□ 1.45
LDB1-201ENST00000361198 ABRAQ8N0Z2 381 aa24.09■■□□□ 1.45
LDB1-201ENST00000361198 ERP44Q9BS26 406 aa24.09■■□□□ 1.45
LDB1-201ENST00000361198 IMPG2Q9BZV3 1241 aa24.09■■□□□ 1.45
LDB1-201ENST00000361198 FAM187AA6NFU0 413 aa24.08■■□□□ 1.45
LDB1-201ENST00000361198 INO80B-WBP1J3KQ70 363 aa24.08■■□□□ 1.45
LDB1-201ENST00000361198 B4GALT5O43286 388 aa24.08■■□□□ 1.45
LDB1-201ENST00000361198 MYBL1P10243 752 aa24.08■■□□□ 1.45
LDB1-201ENST00000361198 AP3M2P53677 418 aa24.08■■□□□ 1.45
LDB1-201ENST00000361198 DRG2P55039 364 aaKnown RBP24.08■■□□□ 1.45
LDB1-201ENST00000361198 RWDD2BP57060 319 aa24.08■■□□□ 1.45
LDB1-201ENST00000361198 GRM1Q13255 1194 aa24.08■■□□□ 1.45
LDB1-201ENST00000361198 CDR2LQ86X02 465 aaPredicted RBP24.08■■□□□ 1.45
LDB1-201ENST00000361198 C3orf20Q8ND61 904 aa24.08■■□□□ 1.45
LDB1-201ENST00000361198 FMO2Q99518 471 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms