RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 TMEM175Q9BSA9 504 aa13.38□□□□□ -0.27
NIF3L1-201ENST00000359683 GOLGA2P5Q9HBQ8 144 aa13.38□□□□□ -0.27
NIF3L1-201ENST00000359683 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 AP5Z1O43299 807 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 TLL1O43897 1013 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 PHACTR2O75167 634 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 HLA-DRAP01903 254 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 ALDH2P05091 517 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 ITGB3P05106 788 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 MYL7Q01449 175 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 CETN1Q12798 172 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 NCOA4Q13772 614 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 UPP1Q16831 310 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 EPC2Q52LR7 807 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 DCLRE1AQ6PJP8 1040 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 EHBP1Q8NDI1 1231 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 FBXL13Q8NEE6 735 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 LMO3Q8TAP4 145 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 TAS1R2Q8TE23 839 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 SEMA4DQ92854 862 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 RAB20Q9NX57 234 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 IFNKQ9P0W0 207 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 HCSTQ9UBK5 93 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 DNAJB4Q9UDY4 337 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 AGAP1Q9UPQ3 857 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 GBF1Q92538 1859 aa13.37□□□□□ -0.27
NIF3L1-201ENST00000359683 GOLGA6L3A6NEY3 463 aa13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 CASTOR2A6NHX0 329 aa13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 GRXCR1A8MXD5 290 aa13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 PES1O00541 588 aaKnown RBP13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 TEX33O43247 280 aa13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 STAU1O95793 577 aaKnown RBP13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 GALTP07902 379 aa13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 POLR2BP30876 1174 aaKnown RBP13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 CLCNKBP51801 687 aa13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 UBXN1Q04323 297 aa13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 KCNMA1Q12791 1236 aa13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 TRPC3Q13507 836 aa13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 SGSM1Q2NKQ1 1148 aa13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 FKBP15Q5T1M5 1219 aa13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 CD300LGQ6UXG3 332 aa13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 LRRC52Q8N7C0 313 aa13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 CDX2Q99626 313 aaPredicted RBP13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 PAAF1Q9BRP4 392 aa13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 XYLT2Q9H1B5 865 aa13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 TTYH1Q9H313 450 aaPredicted RBP13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 CACNG4Q9UBN1 327 aa13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 MRPL42Q9Y6G3 142 aaKnown RBP13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 LAMA2P24043 3122 aaKnown RBP13.36□□□□□ -0.27
NIF3L1-201ENST00000359683 PODXLO00592 558 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 NRP1O14786 923 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 PPEF2O14830 753 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 LRRN2O75325 713 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 KRT19P08727 400 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 LINC00271P0C7V0 271 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 ATICP31939 592 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 SLC11A1P49279 550 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 RABGGTBP53611 331 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 MYL6P60660 151 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 GSE1Q14687 1217 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 EXOC3L4Q17RC7 722 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 GBP6Q6ZN66 633 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 FIBCD1Q8N539 461 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 TAF4BQ92750 862 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 CLP1Q92989 425 aaKnown RBP13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 ERGIC2Q96RQ1 377 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 CRACR2AQ9BSW2 395 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 XPO4Q9C0E2 1151 aaKnown RBP13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 VRTNQ9H8Y1 702 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 FAN1Q9Y2M0 1017 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 PCDHA11Q9Y5I1 949 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 LCHNA4D1U4 455 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 CARNS1A5YM72 827 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 TMEM189-UBE2V1I3L0A0 370 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 CBFA2T2O43439 604 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 ZC3H11AO75152 810 aaKnown RBP eCLIP13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 ASS1P00966 412 aaKnown RBP13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 PAX3P23760 479 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 IGFBP6P24592 240 aaPredicted RBP13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 PON1P27169 355 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 PNPLA4P41247 253 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 PIK3CAP42336 1068 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 OR1G1P47890 313 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 BCAR1P56945 870 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 LILRA4P59901 499 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 DPY19L2P1Q6NXN4 242 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 KCNT2Q6UVM3 1135 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 C3orf58Q8NDZ4 430 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 MYLIPQ8WY64 445 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 RABGGTAQ92696 567 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 HPDLQ96IR7 371 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 COLEC11Q9BWP8 271 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 GRPEL1Q9HAV7 217 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 SIK3Q9Y2K2 1263 aa13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 R3HCC1Q9Y3T6 440 aaKnown RBP13.35□□□□□ -0.27
NIF3L1-201ENST00000359683 SCN1AP35498 2009 aa13.34□□□□□ -0.27
NIF3L1-201ENST00000359683 CUL9Q8IWT3 2517 aa13.34□□□□□ -0.27
NIF3L1-201ENST00000359683 A0A1W2PQC6 194 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms