RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 RABGAP1LQ5R372 815 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 PABPC5Q96DU9 382 aaKnown RBP19.28■□□□□ 0.68
SHANK1-202ENST00000359082 PITPNM2Q9BZ72 1349 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 TARSL2A2RTX5 802 aaKnown RBP19.28■□□□□ 0.68
SHANK1-202ENST00000359082 UPP2O95045 317 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 PGBD3Q8N328 593 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 IL1RL2Q9HB29 575 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 RAB6BQ9NRW1 208 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 PRR23D1E9PI22 279 aaPredicted RBP19.28■□□□□ 0.68
SHANK1-202ENST00000359082 PRR23D2P0DMB1 279 aaPredicted RBP19.28■□□□□ 0.68
SHANK1-202ENST00000359082 FAM180AQ6UWF9 173 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 TSPAN17Q96FV3 270 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 APEX2Q9UBZ4 518 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 ZBTB12Q9Y330 459 aaPredicted RBP19.28■□□□□ 0.68
SHANK1-202ENST00000359082 SRBD1Q8N5C6 995 aaKnown RBP19.28■□□□□ 0.68
SHANK1-202ENST00000359082 ARHGEF26Q96DR7 871 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 ARL2BPQ9Y2Y0 163 aa19.28■□□□□ 0.68
SHANK1-202ENST00000359082 A0A1W2PQC6 194 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 DGKIO75912 1065 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 C16orf89Q6UX73 402 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 NUDT18Q6ZVK8 323 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 C11orf96Q7Z7L8 435 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 HORMAD1Q86X24 394 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 ZNF473Q8WTR7 871 aaKnown RBP19.27■□□□□ 0.68
SHANK1-202ENST00000359082 LSM7Q9UK45 103 aaKnown RBP19.27■□□□□ 0.68
SHANK1-202ENST00000359082 ETFBP38117 255 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 GALNT4Q8N4A0 578 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 ORC4O43929 436 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 PDGFRAP16234 1089 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 WDR24Q96S15 920 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 V9GYQ6 96 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 SPATA31E1Q6ZUB1 1445 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 TET3O43151 1660 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 HNRNPCP07910 306 aaKnown RBP eCLIP19.27■□□□□ 0.68
SHANK1-202ENST00000359082 MYBP10242 640 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 PLA2G4AP47712 749 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 SGO1Q5FBB7 561 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 DOLKQ9UPQ8 538 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 NEU2Q9Y3R4 380 aa19.27■□□□□ 0.68
SHANK1-202ENST00000359082 MDH1P40925 334 aaKnown RBP19.27■□□□□ 0.67
SHANK1-202ENST00000359082 TBL3Q12788 808 aaKnown RBP19.27■□□□□ 0.67
SHANK1-202ENST00000359082 INPP5DQ92835 1189 aa19.27■□□□□ 0.67
SHANK1-202ENST00000359082 APOL5Q9BWW9 433 aa19.27■□□□□ 0.67
SHANK1-202ENST00000359082 ZSCAN32Q9NX65 697 aa19.27■□□□□ 0.67
SHANK1-202ENST00000359082 KRT87PA6NCN2 255 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 MAP3K7CLP57077 242 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 CAPRIN2Q6IMN6 1127 aaKnown RBP19.26■□□□□ 0.67
SHANK1-202ENST00000359082 RAET1EQ8TD07 263 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 DPF2Q92785 391 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 AGTP01019 485 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 VSNL1P62760 191 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 MEI1Q5TIA1 1274 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 IFNEQ86WN2 208 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 EPN3Q9H201 632 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 H2AFY2Q9P0M6 372 aaPredicted RBP19.26■□□□□ 0.67
SHANK1-202ENST00000359082 PDXKO00764 312 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 AIM2O14862 343 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 RARBP10826 455 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 RCAN1P53805 252 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 ZNF200P98182 395 aaPredicted RBP19.26■□□□□ 0.67
SHANK1-202ENST00000359082 PTK7Q13308 1070 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 SH2D3CQ8N5H7 860 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 ZFP42Q96MM3 310 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 RBM15Q96T37 977 aaKnown RBP eCLIP19.26■□□□□ 0.67
SHANK1-202ENST00000359082 PSMC3IPQ9P2W1 217 aaPredicted RBP19.26■□□□□ 0.67
SHANK1-202ENST00000359082 NLRP11P59045 1033 aaKnown RBP19.26■□□□□ 0.67
SHANK1-202ENST00000359082 CHMP2BQ9UQN3 213 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 CCDC142Q17RM4 750 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 THAP11Q96EK4 314 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 LATS2Q9NRM7 1088 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 FBXO2Q9UK22 296 aaPredicted RBP19.26■□□□□ 0.67
SHANK1-202ENST00000359082 ADCY10Q96PN6 1610 aa19.26■□□□□ 0.67
SHANK1-202ENST00000359082 RBP5P82980 135 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 ARHGEF7Q14155 803 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 LRRC8BQ6P9F7 803 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 MED15Q96RN5 788 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 CAPZA2P47755 286 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 RINLQ6ZS11 566 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 TRIM10Q9UDY6 481 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 KCNH4Q9UQ05 1017 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 AP3B1O00203 1094 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 SHCBP1Q8NEM2 672 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 REEP2Q9BRK0 252 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 ADGRL3Q9HAR2 1447 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 CYTH3O43739 400 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 ZNF189O75820 626 aaPredicted RBP19.25■□□□□ 0.67
SHANK1-202ENST00000359082 S100A5P33763 92 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 HS6ST3Q8IZP7 471 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 OR2W6PQ8NHA6 318 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 SLC7A14Q8TBB6 771 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 IL17RAQ96F46 866 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 SMG5Q9UPR3 1016 aaKnown RBP19.25■□□□□ 0.67
SHANK1-202ENST00000359082 PHF20L1A8MW92 1017 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 KIF1CO43896 1103 aaKnown RBP19.25■□□□□ 0.67
SHANK1-202ENST00000359082 NCOA4Q13772 614 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 RBBP8NLQ8NC74 664 aaPredicted RBP19.25■□□□□ 0.67
SHANK1-202ENST00000359082 ARMC2Q8NEN0 867 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 SMARCAL1Q9NZC9 954 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 SNX12Q9UMY4 172 aa19.25■□□□□ 0.67
SHANK1-202ENST00000359082 SLC30A1Q9Y6M5 507 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms