RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 CAPN9O14815 690 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 DAPK3O43293 454 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 DGKIO75912 1065 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 GH2P01242 217 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 HLA-DOAP06340 250 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 PFKPQ01813 784 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 AP1B1Q10567 949 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 SNAPC2Q13487 334 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 IRF5Q13568 498 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 MTMR3Q13615 1198 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 CUL1Q13616 776 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 ZNF174Q15697 407 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 PIK3AP1Q6ZUJ8 805 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 TMTC3Q6ZXV5 915 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 PRRT2Q7Z6L0 340 aaPredicted RBP9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 CASP10Q92851 521 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 COA7Q96BR5 231 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 AZI2Q9H6S1 392 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 TMEM59LQ9UK28 342 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 PACSIN2Q9UNF0 486 aaPredicted RBP9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 DOLKQ9UPQ8 538 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 TTLL3Q9Y4R7 772 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 POTEFA5A3E0 1075 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 CCDC85CA6NKD9 419 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 TLR2O60603 784 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 CRHR2Q13324 411 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 ACSBG2Q5FVE4 666 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 C4orf50Q6ZRC1 276 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 HS2ST1Q7LGA3 356 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 ZBED8Q8IZ13 594 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 PPFIBP2Q8ND30 876 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 CEP70Q8NHQ1 597 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 PIGSQ96S52 555 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 CGREF1Q99674 301 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 TXLNGQ9NUQ3 528 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 DEXIO95424 95 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 PCSK6P29122 969 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 SP3Q02447 781 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 SLC34A1Q06495 639 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 CCDC153Q494R4 210 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 KCTD21Q4G0X4 260 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 METTL21CQ5VZV1 264 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 SCAIQ8N9R8 606 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 CCT7Q99832 543 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 TRPC7Q9HCX4 862 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 TMOD2Q9NZR1 351 aa9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 TMA7Q9Y2S6 64 aaKnown RBP9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 E9PBE3 544 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 LCA5LO95447 670 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 PTPREP23469 700 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 FUT2Q10981 343 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 SPA17Q15506 151 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 RNF43Q68DV7 783 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 FAM186BQ8IYM0 893 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 BBS5Q8N3I7 341 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 FBXL16Q8N461 479 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 USP38Q8NB14 1042 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 MGARPQ8TDB4 240 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 STAMQ92783 540 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 TXLNGYQ9BZA5 131 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 NDEL1Q9GZM8 345 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 R3HDMLQ9H3Y0 253 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 ARHGAP20Q9P2F6 1191 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 RNF14Q9UBS8 474 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 MAD2L2Q9UI95 211 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 WASF2Q9Y6W5 498 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 TNRC18O15417 2968 aaPredicted RBP9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 WDR19Q8NEZ3 1342 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 CNTNAP5Q8WYK1 1306 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 MYH6P13533 1939 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 ZNF862O60290 1169 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 FTCDO95954 541 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 MMP1P03956 469 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 FGRP09769 529 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 TOB1P50616 345 aaPredicted RBP9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 DEPDC1Q5TB30 811 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 CABP7Q86V35 215 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 DDX12PQ92771 950 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 ERP27Q96DN0 273 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 PGM2Q96G03 612 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 PLIN2Q99541 437 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 MLXIPLQ9NP71 852 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 TRIM17Q9Y577 477 aa9.87□□□□□ -0.83
SMARCAL1-202ENST00000358207 LGALS16A8MUM7 142 aa9.86□□□□□ -0.83
SMARCAL1-202ENST00000358207 LMNAP02545 664 aaKnown RBP9.86□□□□□ -0.83
SMARCAL1-202ENST00000358207 VDRP11473 427 aa9.86□□□□□ -0.83
SMARCAL1-202ENST00000358207 EEF2P13639 858 aaKnown RBP9.86□□□□□ -0.83
SMARCAL1-202ENST00000358207 MCM7P33993 719 aa9.86□□□□□ -0.83
SMARCAL1-202ENST00000358207 RGS2P41220 211 aa9.86□□□□□ -0.83
SMARCAL1-202ENST00000358207 NAA20P61599 178 aa9.86□□□□□ -0.83
SMARCAL1-202ENST00000358207 MSLNQ13421 630 aaPredicted RBP9.86□□□□□ -0.83
SMARCAL1-202ENST00000358207 GPAT2Q6NUI2 795 aa9.86□□□□□ -0.83
SMARCAL1-202ENST00000358207 NOSTRINQ8IVI9 506 aa9.86□□□□□ -0.83
SMARCAL1-202ENST00000358207 INPP5DQ92835 1189 aa9.86□□□□□ -0.83
SMARCAL1-202ENST00000358207 GJA10Q969M2 543 aa9.86□□□□□ -0.83
SMARCAL1-202ENST00000358207 PAGE5Q96GU1 130 aa9.86□□□□□ -0.83
SMARCAL1-202ENST00000358207 CCDC42Q96M95 316 aa9.86□□□□□ -0.83
SMARCAL1-202ENST00000358207 MIPEPQ99797 713 aa9.86□□□□□ -0.83
SMARCAL1-202ENST00000358207 MRPL46Q9H2W6 279 aaKnown RBP9.86□□□□□ -0.83
SMARCAL1-202ENST00000358207 MTMR4Q9NYA4 1195 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms