RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 TMEM265A0A087WTH1 108 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 ZNF862O60290 1169 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 E2F4Q16254 413 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 ARL13BQ3SXY8 428 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 COBLL1Q53SF7 1204 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 FOXR2Q6PJQ5 311 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 SLC43A3Q8NBI5 491 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 CCDC26Q8TAB7 109 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 PPP1R13LQ8WUF5 828 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 ZNF830Q96NB3 372 aaPredicted RBP9.83□□□□□ -0.84
UPF2-202ENST00000357604 A0A1B0GUA9 196 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 ZNF131P52739 623 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 WDR72Q3MJ13 1102 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 PPP1R9BQ96SB3 815 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 TLR9Q9NR96 1032 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 PCDHB8Q9UN66 801 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 TRAF3IP3Q9Y228 551 aa9.83□□□□□ -0.84
UPF2-202ENST00000357604 PIGRP01833 764 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 SMAD3P84022 425 aaKnown RBP9.82□□□□□ -0.84
UPF2-202ENST00000357604 ARHGAP29Q52LW3 1261 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 GLRA4Q5JXX5 417 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 PPM1EQ8WY54 764 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 MRPS31Q92665 395 aaKnown RBP9.82□□□□□ -0.84
UPF2-202ENST00000357604 TCF25Q9BQ70 676 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 SELENOOQ9BVL4 669 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 RAB20Q9NX57 234 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 IFNKQ9P0W0 207 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 A0A0G2JMZ2 1700 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 ARL5CA6NH57 179 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 HLA-DRAP01903 254 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 CYBBP04839 570 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 TYMPP19971 482 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 CTNNA2P26232 953 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 SPIRE1Q08AE8 756 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 NT5DC1Q5TFE4 455 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 PLPP4Q5VZY2 271 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 IFNLR1Q8IU57 520 aaPredicted RBP9.82□□□□□ -0.84
UPF2-202ENST00000357604 TMEM192Q8IY95 271 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 LRRC52Q8N7C0 313 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 LPPQ93052 612 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 SLITRK1Q96PX8 696 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 CBX8Q9HC52 389 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 THSD7BQ9C0I4 1608 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 STK25O00506 426 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 DAPK3O43293 454 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 POLR2FP61218 127 aaKnown RBP9.82□□□□□ -0.84
UPF2-202ENST00000357604 RBL2Q08999 1139 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 HSP90AA4PQ58FG1 418 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 C1orf228Q6PIY5 440 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 JAKMIP2Q96AA8 810 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 HERC2P3Q9BVR0 1158 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 INTS13Q9NVM9 706 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 IMPACTQ9P2X3 320 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 CALB1P05937 261 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 KPNA1P52294 538 aaPredicted RBP9.82□□□□□ -0.84
UPF2-202ENST00000357604 WDR5P61964 334 aaKnown RBP9.82□□□□□ -0.84
UPF2-202ENST00000357604 GRIN1Q05586 938 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 KCNH2Q12809 1159 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 HADHQ16836 314 aaKnown RBP9.82□□□□□ -0.84
UPF2-202ENST00000357604 DDX42Q86XP3 938 aaKnown RBP eCLIP9.82□□□□□ -0.84
UPF2-202ENST00000357604 SPC24Q8NBT2 197 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 ADAM28Q9UKQ2 775 aa9.82□□□□□ -0.84
UPF2-202ENST00000357604 M0QYV0 167 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 ZBTB39O15060 712 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 MYBL1P10243 752 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 ADORA2BP29275 332 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 BTBD8Q5XKL5 378 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 LEMD2Q8NC56 503 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.81□□□□□ -0.84
UPF2-202ENST00000357604 MED15Q96RN5 788 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 GRPEL1Q9HAV7 217 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 CEP72Q9P209 647 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 IGKV6-21A0A0C4DH24 114 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 CHRNA1P02708 482 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 FOSL2P15408 326 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 FMO5P49326 533 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 CLUL1Q15846 466 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 ANKRD40Q6AI12 368 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 SLC9A9Q8IVB4 645 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 ELOVL4Q9GZR5 314 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 H0YGN5 161 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 FAM163BP0C2L3 166 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 FAM200BP0CF97 657 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 DNAJB2P25686 324 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 NOP2P46087 812 aaKnown RBP9.81□□□□□ -0.84
UPF2-202ENST00000357604 PABPC1LQ4VXU2 614 aaKnown RBP9.81□□□□□ -0.84
UPF2-202ENST00000357604 ZNF677Q86XU0 584 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 PDZD8Q8NEN9 1154 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 SCFD1Q8WVM8 642 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 MMTAG2Q9BU76 263 aaKnown RBP9.81□□□□□ -0.84
UPF2-202ENST00000357604 PDE11AQ9HCR9 933 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 CDH9Q9ULB4 789 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 ASTN1O14525 1302 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 KPNA7A9QM74 516 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 FBXO21O94952 628 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 GBP2P32456 591 aaPredicted RBP9.81□□□□□ -0.84
UPF2-202ENST00000357604 BCAR1P56945 870 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 C10orf76Q5T2E6 689 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 TMEM35BQ8NCS4 154 aa9.81□□□□□ -0.84
UPF2-202ENST00000357604 NTPCRQ9BSD7 190 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms