RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 KMT5AQ9NQR1 393 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 ZDHHC18Q9NUE0 388 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 SETD4Q9NVD3 440 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 NCANO14594 1321 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 ADGRA3Q8IWK6 1321 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 LRRIQ4A6NIV6 560 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 CCT8L1PA6NM43 557 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 DDX3XO00571 662 aaKnown RBP eCLIP13.56□□□□□ -0.242e-12■■■■□ 19.9
RTFDC1-202ENST00000357348 HMGCRP04035 888 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 RARBP10826 455 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 MMP13P45452 471 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 CPT1AP50416 773 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 SLC26A2P50443 739 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 DRG2P55039 364 aaKnown RBP13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 PTENP60484 403 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 IRF5Q13568 498 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 ODF2Q5BJF6 829 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 DUPD1Q68J44 220 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 EFCAB12Q6NXP0 572 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 EPM2AIP1Q7L775 607 aaPredicted RBP13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 HAUS6Q7Z4H7 955 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 SLC30A5Q8TAD4 765 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 SPAG5Q96R06 1193 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 LRRC4CQ9HCJ2 640 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 SUFUQ9UMX1 484 aa13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 UTP11Q9Y3A2 253 aaKnown RBP13.56□□□□□ -0.24
RTFDC1-202ENST00000357348 DDX3YO15523 660 aaKnown RBP13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 DUSP11O75319 330 aaKnown RBP13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 MAFO75444 373 aaPredicted RBP13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 MKRN4PQ13434 485 aaPredicted RBP13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 EXOC3L4Q17RC7 722 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 KNOP1Q1ED39 458 aaKnown RBP13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 CXCL17Q6UXB2 119 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 HOOK3Q86VS8 718 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 SYCP3Q8IZU3 236 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 KIFAP3Q92845 792 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 RAB17Q9H0T7 212 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 XPNPEP3Q9NQH7 507 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 BCCIPQ9P287 314 aaKnown RBP eCLIP13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 SEL1LQ9UBV2 794 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 SLC12A4Q9UP95 1085 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 DENND3A2RUS2 1198 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 GTPBP10A4D1E9 387 aaKnown RBP13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 FAM187AA6NFU0 413 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 INHAP05111 366 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 SRGAP2CP0DJJ0 459 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 GLRA2P23416 452 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 ELF3P78545 371 aaPredicted RBP13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 RIPK1Q13546 671 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 CPLX4Q7Z7G2 160 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 RHPN2Q8IUC4 686 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 CCDC197Q8NCU1 140 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 ATXN2LQ8WWM7 1075 aaKnown RBP13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 PRPF31Q8WWY3 499 aaKnown RBP13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 IFT74Q96LB3 600 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 FMO2Q99518 471 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 TMEM109Q9BVC6 243 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 ADAM7Q9H2U9 754 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 WBP1LQ9NX94 342 aa13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 ARMCX3Q9UH62 379 aaPredicted RBP13.55□□□□□ -0.24
RTFDC1-202ENST00000357348 PDXKO00764 312 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 SLC16A3O15427 465 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 RFC5P40937 340 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 GRIK4Q16099 956 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 ENOX2Q16206 610 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 BMT2Q1RMZ1 405 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 BRDTQ58F21 947 aaPredicted RBP13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 MIEF2Q96C03 454 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 NLRP4Q96MN2 994 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 SYT11Q9BT88 431 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 CELF4Q9BZC1 486 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 PCDHB13Q9Y5F0 798 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 ZMYM2Q9UBW7 1377 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 CAND2O75155 1236 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 CSDE1O75534 798 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 FERP16591 822 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 GRK4P32298 578 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 ZNF200P98182 395 aaPredicted RBP13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 TMEM62Q0P6H9 643 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 MFSD10Q14728 455 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 TNFAIP8L3Q5GJ75 292 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 CRELD2Q6UXH1 353 aaPredicted RBP13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 VPS36Q86VN1 386 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 TMEM161BQ8NDZ6 487 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 ERP44Q9BS26 406 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 TIPINQ9BVW5 301 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 CARD9Q9H257 536 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 PABPC3Q9H361 631 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 METTL14Q9HCE5 456 aaKnown RBP13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 AJAP1Q9UKB5 411 aaPredicted RBP13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 AMFRQ9UKV5 643 aa13.54□□□□□ -0.24
RTFDC1-202ENST00000357348 TGFB1I1O43294 461 aa13.53□□□□□ -0.24
RTFDC1-202ENST00000357348 C22orf31O95567 290 aa13.53□□□□□ -0.24
RTFDC1-202ENST00000357348 F2P00734 622 aa13.53□□□□□ -0.24
RTFDC1-202ENST00000357348 VTNP04004 478 aa13.53□□□□□ -0.24
RTFDC1-202ENST00000357348 TMEM253P0C7T8 217 aa13.53□□□□□ -0.24
RTFDC1-202ENST00000357348 SMIM10L2AP0DMW4 78 aa13.53□□□□□ -0.24
RTFDC1-202ENST00000357348 SMIM10L2BP0DMW5 78 aa13.53□□□□□ -0.24
RTFDC1-202ENST00000357348 HOXD8P13378 290 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms