RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.86□□□□□ -0.51
FN1-204ENST00000356005 FGGP02679 453 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 NCF2P19878 526 aaPredicted RBP11.86□□□□□ -0.51
FN1-204ENST00000356005 ZNF177Q13360 481 aaPredicted RBP11.86□□□□□ -0.51
FN1-204ENST00000356005 ANKRD40Q6AI12 368 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 CALML6Q8TD86 181 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 SENP7Q9BQF6 1050 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 PPP1R9AQ9ULJ8 1098 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 RHOBTB3O94955 611 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 FTCDO95954 541 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 MORF4L2Q15014 288 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 PCSK1NQ9UHG2 260 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 NAGPAQ9UK23 515 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 DYRK3O43781 588 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 C7orf25Q9BPX7 421 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 POLR3CQ9BUI4 534 aaPredicted RBP11.86□□□□□ -0.51
FN1-204ENST00000356005 APEX2Q9UBZ4 518 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 PITPNM2Q9BZ72 1349 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 CXCR5P32302 372 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 ATXN3P54252 364 aaPredicted RBP11.86□□□□□ -0.51
FN1-204ENST00000356005 GPATCH11Q8N954 259 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 ZNF557Q8N988 423 aaPredicted RBP11.86□□□□□ -0.51
FN1-204ENST00000356005 SUDS3Q9H7L9 328 aaPredicted RBP11.86□□□□□ -0.51
FN1-204ENST00000356005 TXLNGQ9NUQ3 528 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 COL14A1Q05707 1796 aaKnown RBP11.86□□□□□ -0.51
FN1-204ENST00000356005 NPM3O75607 178 aaKnown RBP11.86□□□□□ -0.51
FN1-204ENST00000356005 VCAM1P19320 739 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 HOMEZQ8IX15 550 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 CSGALNACT1Q8TDX6 532 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 GPR63Q9BZJ6 419 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 DPP3Q9NY33 737 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 CPA4Q9UI42 421 aa11.86□□□□□ -0.51
FN1-204ENST00000356005 P4HA2O15460 535 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 ZC3H11AO75152 810 aaKnown RBP eCLIP11.85□□□□□ -0.512e-43■□□□□ 8.4
FN1-204ENST00000356005 RPA1P27694 616 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 GPS1Q13098 491 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 CCDC197Q8NCU1 140 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 SPACA6W5XKT8 324 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 PDIA6Q15084 440 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 PID1Q7Z2X4 250 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 SIRT2Q8IXJ6 389 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 RNF208Q9H0X6 261 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 AKAP7Q9P0M2 348 aaPredicted RBP11.85□□□□□ -0.51
FN1-204ENST00000356005 UXTQ9UBK9 157 aaPredicted RBP11.85□□□□□ -0.51
FN1-204ENST00000356005 MST1RQ04912 1400 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 POLRMTO00411 1230 aaKnown RBP11.85□□□□□ -0.51
FN1-204ENST00000356005 FKTNO75072 461 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 OAS2P29728 719 aaKnown RBP11.85□□□□□ -0.51
FN1-204ENST00000356005 IRAK1BP1Q5VVH5 260 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 SAYSD1Q9NPB0 183 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 ABHD10Q9NUJ1 306 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 NMRK1Q9NWW6 199 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 PLA2G4CQ9UP65 541 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 RASA1P20936 1047 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 HERVK_113P62684 666 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 DHX9Q08211 1270 aaKnown RBP11.85□□□□□ -0.51
FN1-204ENST00000356005 MTHFD1LQ6UB35 978 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 RRM2BQ7LG56 351 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 GPT2Q8TD30 523 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 SLC26A7Q8TE54 656 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 CCDC138Q96M89 665 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 PDAP1Q13442 181 aaKnown RBP11.85□□□□□ -0.51
FN1-204ENST00000356005 PDK1Q15118 436 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 GIMAP4Q9NUV9 329 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 A0A087WUV0 522 aaPredicted RBP11.85□□□□□ -0.51
FN1-204ENST00000356005 DTNBO60941 627 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 KLRC2P26717 231 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 FXR2P51116 673 aaKnown RBP eCLIP11.85□□□□□ -0.51
FN1-204ENST00000356005 GTF2A1P52655 376 aaPredicted RBP11.85□□□□□ -0.51
FN1-204ENST00000356005 MTFR1Q15390 333 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 SPTLC3Q9NUV7 552 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 POLLQ9UGP5 575 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 TBK1Q9UHD2 729 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 TMX2Q9Y320 296 aa11.85□□□□□ -0.51
FN1-204ENST00000356005 COL5A2P05997 1499 aaPredicted RBP11.85□□□□□ -0.51
FN1-204ENST00000356005 CKMP06732 381 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 NCAM1P13591 858 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 CHRNA3P32297 505 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 ATN1P54259 1190 aaPredicted RBP11.84□□□□□ -0.51
FN1-204ENST00000356005 DCAF6Q58WW2 860 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 PCNX4Q63HM2 1172 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 MOXD1Q6UVY6 613 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 LINC00523Q86TU6 105 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 FBXO32Q969P5 355 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 PRMT6Q96LA8 375 aaPredicted RBP11.84□□□□□ -0.51
FN1-204ENST00000356005 FBXO44Q9H4M3 255 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 XPNPEP3Q9NQH7 507 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 STX18Q9P2W9 335 aaKnown RBP11.84□□□□□ -0.51
FN1-204ENST00000356005 MYPNQ86TC9 1320 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 MAPK13O15264 365 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 CKBP12277 381 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 AXLP30530 894 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 POU5F1BQ06416 359 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 TMC7Q7Z402 723 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 ECT2Q9H8V3 914 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 AFF4Q9UHB7 1163 aaKnown RBP11.84□□□□□ -0.51
FN1-204ENST00000356005 PALMO75781 387 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 BRAFP15056 766 aa11.84□□□□□ -0.51
FN1-204ENST00000356005 LBRQ14739 615 aaKnown RBP11.84□□□□□ -0.51
FN1-204ENST00000356005 ZNF280DQ6N043 979 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms