RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 ALG13Q9NP73 1137 aaKnown RBP15.11■□□□□ 0.01
RLIM-202ENST00000349225 DOT1LQ8TEK3 1739 aa15.11■□□□□ 0.01
RLIM-202ENST00000349225 VAV1P15498 845 aa15.11■□□□□ 0.01
RLIM-202ENST00000349225 MAGEA4P43358 317 aa15.11■□□□□ 0.01
RLIM-202ENST00000349225 PDCD7Q8N8D1 485 aaKnown RBP15.11■□□□□ 0.01
RLIM-202ENST00000349225 STKLD1Q8NE28 680 aa15.11■□□□□ 0.01
RLIM-202ENST00000349225 MCUR1Q96AQ8 359 aa15.11■□□□□ 0.01
RLIM-202ENST00000349225 FNBP1Q96RU3 617 aa15.11■□□□□ 0.01
RLIM-202ENST00000349225 DCLK3Q9C098 648 aa15.11■□□□□ 0.01
RLIM-202ENST00000349225 CLIC5Q9NZA1 410 aa15.11■□□□□ 0.01
RLIM-202ENST00000349225 NAV1Q8NEY1 1877 aa15.1■□□□□ 0.01
RLIM-202ENST00000349225 COL5A2P05997 1499 aaPredicted RBP15.1■□□□□ 0.01
RLIM-202ENST00000349225 SGPL1O95470 568 aa15.1■□□□□ 0.01
RLIM-202ENST00000349225 NMT1P30419 496 aaKnown RBP15.1■□□□□ 0.01
RLIM-202ENST00000349225 SLC18A1P54219 525 aa15.1■□□□□ 0.01
RLIM-202ENST00000349225 PCNX4Q63HM2 1172 aa15.1■□□□□ 0.01
RLIM-202ENST00000349225 LRRC6Q86X45 466 aa15.1■□□□□ 0.01
RLIM-202ENST00000349225 CLEC10AQ8IUN9 316 aa15.1■□□□□ 0.01
RLIM-202ENST00000349225 RELL1Q8IUW5 271 aa15.1■□□□□ 0.01
RLIM-202ENST00000349225 VPS52Q8N1B4 723 aa15.1■□□□□ 0.01
RLIM-202ENST00000349225 ZNF564Q8TBZ8 553 aaPredicted RBP15.1■□□□□ 0.01
RLIM-202ENST00000349225 RBM15Q96T37 977 aaKnown RBP eCLIP15.1■□□□□ 0.01
RLIM-202ENST00000349225 EYA3Q99504 573 aa15.1■□□□□ 0.01
RLIM-202ENST00000349225 NHSQ6T4R5 1651 aa15.1■□□□□ 0.01
RLIM-202ENST00000349225 MARCH6O60337 910 aa15.1■□□□□ 0.01
RLIM-202ENST00000349225 CETN2P41208 172 aa15.1■□□□□ 0.01
RLIM-202ENST00000349225 DLG4P78352 724 aa15.1■□□□□ 0.01
RLIM-202ENST00000349225 ANKS1BQ7Z6G8 1248 aa15.1■□□□□ 0.01
RLIM-202ENST00000349225 SYT2Q8N9I0 419 aaPredicted RBP15.1■□□□□ 0.01
RLIM-202ENST00000349225 CELF1Q92879 486 aaKnown RBP15.1■□□□□ 0.01
RLIM-202ENST00000349225 CDK5RAP2Q96SN8 1893 aa15.1■□□□□ 0.01
RLIM-202ENST00000349225 HNRNPCL1O60812 293 aaKnown RBP15.09■□□□□ 0.01
RLIM-202ENST00000349225 NOP9Q86U38 636 aaKnown RBP15.09■□□□□ 0.01
RLIM-202ENST00000349225 NRAPQ86VF7 1730 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 MAPKAPK5Q8IW41 473 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 MPP4Q96JB8 637 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 CENPKQ9BS16 269 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.09■□□□□ 0.013e-36■■■■■ 447.2
RLIM-202ENST00000349225 A0A0J9YVX5 310 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.09■□□□□ 0.01
RLIM-202ENST00000349225 ZWINTO95229 277 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 KRT15P19012 456 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 RPL13P26373 211 aaKnown RBP15.09■□□□□ 0.01
RLIM-202ENST00000349225 CDK8P49336 464 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 MAP3K10Q02779 954 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 IZUMO3Q5VZ72 239 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 CYTH2Q99418 400 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 ANKFY1Q9P2R3 1169 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 CHMP2BQ9UQN3 213 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 PSMC2P35998 433 aaKnown RBP15.09■□□□□ 0.01
RLIM-202ENST00000349225 RAP1GDS1P52306 607 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 MSLNQ13421 630 aaPredicted RBP15.09■□□□□ 0.01
RLIM-202ENST00000349225 HSF5Q4G112 596 aaPredicted RBP15.09■□□□□ 0.01
RLIM-202ENST00000349225 RIPOR1Q6ZS17 1223 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 SLC25A41Q8N5S1 370 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 LENG1Q96BZ8 264 aaPredicted RBP15.09■□□□□ 0.01
RLIM-202ENST00000349225 FAM161BQ96MY7 647 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 SMC6Q96SB8 1091 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 P2RX7Q99572 595 aaKnown RBP15.09■□□□□ 0.01
RLIM-202ENST00000349225 PHACTR1Q9C0D0 580 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 SLC17A7Q9P2U7 560 aa15.09■□□□□ 0.01
RLIM-202ENST00000349225 SMARCA1P28370 1054 aa15.08■□□□□ 0.01
RLIM-202ENST00000349225 PGM1P36871 562 aa15.08■□□□□ 0.01
RLIM-202ENST00000349225 PLOD1Q02809 727 aaPredicted RBP15.08■□□□□ 0.01
RLIM-202ENST00000349225 EFTUD2Q15029 972 aaKnown RBP eCLIP15.08■□□□□ 0.01
RLIM-202ENST00000349225 P3H1Q32P28 736 aa15.08■□□□□ 0.01
RLIM-202ENST00000349225 TREML1Q86YW5 311 aa15.08■□□□□ 0.01
RLIM-202ENST00000349225 ZNF398Q8TD17 642 aa15.08■□□□□ 0.01
RLIM-202ENST00000349225 TTC1Q99614 292 aa15.08■□□□□ 0.01
RLIM-202ENST00000349225 UBE2TQ9NPD8 197 aaPredicted RBP15.08■□□□□ 0.01
RLIM-202ENST00000349225 NOCTQ9UK39 431 aaKnown RBP15.08■□□□□ 0.01
RLIM-202ENST00000349225 GMEB1Q9Y692 573 aa15.08■□□□□ 0.01
RLIM-202ENST00000349225 ABHD2P08910 425 aa15.08■□□□□ 0
RLIM-202ENST00000349225 KRT4P19013 534 aa15.08■□□□□ 0
RLIM-202ENST00000349225 SFT2D3Q587I9 215 aa15.08■□□□□ 0
RLIM-202ENST00000349225 CFAP157Q5JU67 520 aa15.08■□□□□ 0
RLIM-202ENST00000349225 OLFML2BQ68BL8 750 aa15.08■□□□□ 0
RLIM-202ENST00000349225 POLR3CQ9BUI4 534 aaPredicted RBP15.08■□□□□ 0
RLIM-202ENST00000349225 TMEM120AQ9BXJ8 343 aa15.08■□□□□ 0
RLIM-202ENST00000349225 HEMGNQ9BXL5 484 aa15.08■□□□□ 0
RLIM-202ENST00000349225 PLA2G4CQ9UP65 541 aa15.08■□□□□ 0
RLIM-202ENST00000349225 SPATA31A5Q5VU36 1347 aa15.08■□□□□ 0
RLIM-202ENST00000349225 SPATA31A6Q5VVP1 1343 aa15.08■□□□□ 0
RLIM-202ENST00000349225 SPATA31A7Q8IWB4 1347 aa15.08■□□□□ 0
RLIM-202ENST00000349225 USP17L15C9J2P7 530 aa15.08■□□□□ 0
RLIM-202ENST00000349225 USP17L13C9JLJ4 530 aa15.08■□□□□ 0
RLIM-202ENST00000349225 USP17L11C9JVI0 530 aa15.08■□□□□ 0
RLIM-202ENST00000349225 USP17L18D6R9N7 530 aa15.08■□□□□ 0
RLIM-202ENST00000349225 USP17L22D6RA61 530 aa15.08■□□□□ 0
RLIM-202ENST00000349225 USP17L17D6RBQ6 530 aa15.08■□□□□ 0
RLIM-202ENST00000349225 USP17L19D6RCP7 530 aa15.08■□□□□ 0
RLIM-202ENST00000349225 USP17L20D6RJB6 530 aa15.08■□□□□ 0
RLIM-202ENST00000349225 E5RJQ4 531 aa15.08■□□□□ 0
RLIM-202ENST00000349225 VILLO15195 856 aa15.08■□□□□ 0
RLIM-202ENST00000349225 BANF1O75531 89 aa15.08■□□□□ 0
RLIM-202ENST00000349225 DLDP09622 509 aaKnown RBP15.08■□□□□ 0
RLIM-202ENST00000349225 USP17L24Q0WX57 530 aa15.08■□□□□ 0
RLIM-202ENST00000349225 CCDC142Q17RM4 750 aa15.08■□□□□ 0
RLIM-202ENST00000349225 USP17L6PQ6QN14 398 aa15.08■□□□□ 0
RLIM-202ENST00000349225 TDRPQ86YL5 185 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms