RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CGB2Q6NT52 195 aa19.24■□□□□ 0.67
PTP4A3-202ENST00000349124 C15orf39Q6ZRI6 1047 aa19.24■□□□□ 0.67
PTP4A3-202ENST00000349124 MON1BQ7L1V2 547 aa19.24■□□□□ 0.67
PTP4A3-202ENST00000349124 CCDC60Q8IWA6 550 aaPredicted RBP19.24■□□□□ 0.67
PTP4A3-202ENST00000349124 TMEM143Q96AN5 459 aa19.24■□□□□ 0.67
PTP4A3-202ENST00000349124 MRRFQ96E11 262 aaKnown RBP19.24■□□□□ 0.67
PTP4A3-202ENST00000349124 RMDN2Q96LZ7 410 aa19.24■□□□□ 0.67
PTP4A3-202ENST00000349124 TRAIPQ9BWF2 469 aa19.24■□□□□ 0.67
PTP4A3-202ENST00000349124 OSBPL8Q9BZF1 889 aa19.24■□□□□ 0.67
PTP4A3-202ENST00000349124 SEPT9Q9UHD8 586 aaPredicted RBP19.24■□□□□ 0.67
PTP4A3-202ENST00000349124 FZD1Q9UP38 647 aa19.24■□□□□ 0.67
PTP4A3-202ENST00000349124 NR3C2P08235 984 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 RPL7AP62424 266 aaKnown RBP19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 FLAD1Q8NFF5 587 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 PAIP2Q9BPZ3 127 aaKnown RBP19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 TIPINQ9BVW5 301 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 ADAM22Q9P0K1 906 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 WDR46O15213 610 aaKnown RBP19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 SPAG7O75391 227 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 CYP1A1P04798 512 aaPredicted RBP19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 FOXN2P32314 431 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 PSMC4P43686 418 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 NCALDP61601 193 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 MTERF2Q49AM1 385 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 ZNF365Q70YC5 407 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 GSTA5Q7RTV2 222 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 FITM2Q8N6M3 262 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 SUPT20HQ8NEM7 779 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 CKAP2Q8WWK9 683 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 SPIRE2Q8WWL2 714 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 PRCCQ92733 491 aaPredicted RBP19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 RPAP3Q9H6T3 665 aaPredicted RBP19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 ECT2Q9H8V3 914 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 CTDP1Q9Y5B0 961 aaPredicted RBP19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 COL4A5P29400 1685 aa19.23■□□□□ 0.67
PTP4A3-202ENST00000349124 A8MUI8 341 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 C4BPAP04003 597 aaKnown RBP19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 ACO1P21399 889 aaKnown RBP19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 SFNP31947 248 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 MGAT5Q09328 741 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 FASTKD3Q14CZ7 662 aaKnown RBP19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 BRDTQ58F21 947 aaPredicted RBP19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 ZFYVE27Q5T4F4 411 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 WLSQ5T9L3 541 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 FAM47EQ6ZV65 393 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 SAMD3Q8N6K7 520 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 FNBP1Q96RU3 617 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 NSRP1Q9H0G5 558 aaKnown RBP19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 POLR3FQ9H1D9 316 aaPredicted RBP19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 AVENQ9NQS1 362 aaPredicted RBP19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 PCDHB4Q9Y5E5 795 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 ZNFX1Q9P2E3 1918 aaKnown RBP19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 GSTTP1A0A1W2PQM5 241 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 PIAS1O75925 651 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 GTF2H1P32780 548 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 PIK3CAP42336 1068 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 P3H1Q32P28 736 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 WDR44Q5JSH3 913 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 VSIG10LQ86VR7 867 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 SPOCK2Q92563 424 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 HAUS1Q96CS2 278 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 TGS1Q96RS0 853 aaKnown RBP19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 MYCBPQ99417 103 aaPredicted RBP19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 KIF9Q9HAQ2 790 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 PDLIM7Q9NR12 457 aa19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.22■□□□□ 0.67
PTP4A3-202ENST00000349124 RPSAP08865 295 aaKnown RBP19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 LIG4P49917 911 aa19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 CENPCQ03188 943 aa19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 ZACNQ401N2 412 aa19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 FAM182AQ5T1J6 154 aa19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 TXNRD3NBQ6F5E7 133 aa19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 CRELD2Q6UXH1 353 aaPredicted RBP19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 ZNF526Q8TF50 670 aaPredicted RBP19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 TLR3O15455 904 aaKnown RBP19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 STX2P32856 288 aa19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 SLC1A1P43005 524 aa19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 GHRHRQ02643 423 aa19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 TMED2Q15363 201 aa19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 OR5B17Q8NGF7 314 aa19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 RBM15Q96T37 977 aaKnown RBP eCLIP19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 RNF146Q9NTX7 359 aa19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 MCM8Q9UJA3 840 aa19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 DNPEPQ9ULA0 475 aa19.21■□□□□ 0.67
PTP4A3-202ENST00000349124 PCNTO95613 3336 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 IGF2BP3O00425 579 aaKnown RBP eCLIP19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 HARSP12081 509 aaKnown RBP19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 NOMO3P69849 1222 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 PRKCEQ02156 737 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 MIS18BP1Q6P0N0 1132 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 SPATA21Q7Z572 469 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 FAM83AQ86UY5 434 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 KIRREL3Q8IZU9 778 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 CXorf56Q9H5V9 222 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 C10orf88Q9H8K7 445 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 CYP26B1Q9NR63 512 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 NUB1Q9Y5A7 615 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 EDN1P05305 212 aa19.2■□□□□ 0.66
PTP4A3-202ENST00000349124 GSTA1P08263 222 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms