RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 NPTXRO95502 500 aa19.59■□□□□ 0.73
UBE3C-201ENST00000348165 MDM2Q00987 491 aaPredicted RBP19.59■□□□□ 0.73
UBE3C-201ENST00000348165 SKIV2LQ15477 1246 aaKnown RBP19.59■□□□□ 0.73
UBE3C-201ENST00000348165 SNX19Q92543 992 aa19.59■□□□□ 0.73
UBE3C-201ENST00000348165 ZNF512Q96ME7 567 aaPredicted RBP19.59■□□□□ 0.73
UBE3C-201ENST00000348165 GOLGA8RI6L899 631 aa19.59■□□□□ 0.73
UBE3C-201ENST00000348165 CYP2C19P33261 490 aa19.59■□□□□ 0.73
UBE3C-201ENST00000348165 OR1G1P47890 313 aa19.59■□□□□ 0.73
UBE3C-201ENST00000348165 CCDC138Q96M89 665 aa19.59■□□□□ 0.73
UBE3C-201ENST00000348165 YIPF3Q9GZM5 350 aa19.59■□□□□ 0.73
UBE3C-201ENST00000348165 ZC3H4Q9UPT8 1303 aaKnown RBP19.58■□□□□ 0.73
UBE3C-201ENST00000348165 GMNCA6NCL1 334 aa19.58■□□□□ 0.73
UBE3C-201ENST00000348165 HADHAP40939 763 aa19.58■□□□□ 0.73
UBE3C-201ENST00000348165 PHEXP78562 749 aa19.58■□□□□ 0.73
UBE3C-201ENST00000348165 MTM1Q13496 603 aa19.58■□□□□ 0.73
UBE3C-201ENST00000348165 P3H1Q32P28 736 aa19.58■□□□□ 0.73
UBE3C-201ENST00000348165 AGR3Q8TD06 166 aa19.58■□□□□ 0.73
UBE3C-201ENST00000348165 PABPC5Q96DU9 382 aaKnown RBP19.58■□□□□ 0.73
UBE3C-201ENST00000348165 ATP6V1G3Q96LB4 118 aa19.58■□□□□ 0.73
UBE3C-201ENST00000348165 C9orf72Q96LT7 481 aa19.58■□□□□ 0.73
UBE3C-201ENST00000348165 TGS1Q96RS0 853 aaKnown RBP19.58■□□□□ 0.73
UBE3C-201ENST00000348165 SEPT5Q99719 369 aaPredicted RBP19.58■□□□□ 0.73
UBE3C-201ENST00000348165 SH3GL3Q99963 347 aa19.58■□□□□ 0.73
UBE3C-201ENST00000348165 TMEM106CQ9BVX2 250 aa19.58■□□□□ 0.73
UBE3C-201ENST00000348165 H0Y3Z8 333 aa19.58■□□□□ 0.73
UBE3C-201ENST00000348165 TADA3O75528 432 aa19.58■□□□□ 0.73
UBE3C-201ENST00000348165 ESRRBO95718 433 aa19.58■□□□□ 0.73
UBE3C-201ENST00000348165 COMTP21964 271 aa19.58■□□□□ 0.73
UBE3C-201ENST00000348165 HPDLQ96IR7 371 aa19.58■□□□□ 0.73
UBE3C-201ENST00000348165 SMYD3Q9H7B4 428 aa19.58■□□□□ 0.73
UBE3C-201ENST00000348165 DNAJC8O75937 253 aaPredicted RBP19.58■□□□□ 0.72
UBE3C-201ENST00000348165 IMPG1Q17R60 797 aa19.58■□□□□ 0.72
UBE3C-201ENST00000348165 C9orf131Q5VYM1 1079 aa19.58■□□□□ 0.72
UBE3C-201ENST00000348165 SPATA17Q96L03 361 aa19.58■□□□□ 0.72
UBE3C-201ENST00000348165 MRPL46Q9H2W6 279 aaKnown RBP19.58■□□□□ 0.72
UBE3C-201ENST00000348165 XAB2Q9HCS7 855 aaKnown RBP19.58■□□□□ 0.72
UBE3C-201ENST00000348165 SLC13A4Q9UKG4 626 aa19.58■□□□□ 0.72
UBE3C-201ENST00000348165 TFR2Q9UP52 801 aa19.58■□□□□ 0.72
UBE3C-201ENST00000348165 PRG3Q9Y2Y8 225 aaPredicted RBP19.58■□□□□ 0.72
UBE3C-201ENST00000348165 GLRA4Q5JXX5 417 aa19.58■□□□□ 0.72
UBE3C-201ENST00000348165 KRT80Q6KB66 452 aa19.58■□□□□ 0.72
UBE3C-201ENST00000348165 GPBP1L1Q9HC44 474 aaPredicted RBP19.58■□□□□ 0.72
UBE3C-201ENST00000348165 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.58■□□□□ 0.721e-7■■■□□ 14.9
UBE3C-201ENST00000348165 KLK14Q9P0G3 267 aa19.58■□□□□ 0.72
UBE3C-201ENST00000348165 KLRC1P26715 233 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 PIGHQ14442 188 aaPredicted RBP19.57■□□□□ 0.72
UBE3C-201ENST00000348165 ZFP69BQ9UJL9 534 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 SUFUQ9UMX1 484 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 ALG6Q9Y672 507 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 DEUP1Q05D60 604 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 SEC23AQ15436 765 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 FSCBQ5H9T9 825 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 NCLNQ969V3 563 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 AGLP35573 1532 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 C3orf70A6NLC5 250 aaPredicted RBP19.57■□□□□ 0.72
UBE3C-201ENST00000348165 EEF1B2P24534 225 aaKnown RBP19.57■□□□□ 0.72
UBE3C-201ENST00000348165 CLCN3P51790 818 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 SMTNL2Q2TAL5 461 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 DCAF6Q58WW2 860 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 TTC23LQ6PF05 361 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 SLC38A7Q9NVC3 462 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 FGFR1OP2Q9NVK5 253 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 ITGB3P05106 788 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 MORF4L2Q15014 288 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 MGAT5BQ3V5L5 792 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 ZBTB41Q5SVQ8 909 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 RDM1Q8NG50 284 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 PIP4K2CQ8TBX8 421 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 RBM15Q96T37 977 aaKnown RBP eCLIP19.57■□□□□ 0.722e-6■■■■□ 19.9
UBE3C-201ENST00000348165 OSBPL8Q9BZF1 889 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 CXorf56Q9H5V9 222 aa19.57■□□□□ 0.72
UBE3C-201ENST00000348165 RRN3P2A6NIE6 340 aa19.56■□□□□ 0.72
UBE3C-201ENST00000348165 ARFIP2P53365 341 aa19.56■□□□□ 0.72
UBE3C-201ENST00000348165 NOTUMQ6P988 496 aa19.56■□□□□ 0.72
UBE3C-201ENST00000348165 ERO1BQ86YB8 467 aa19.56■□□□□ 0.72
UBE3C-201ENST00000348165 TMX2Q9Y320 296 aa19.56■□□□□ 0.72
UBE3C-201ENST00000348165 TOB1P50616 345 aaPredicted RBP19.56■□□□□ 0.72
UBE3C-201ENST00000348165 DACT3Q96B18 629 aaPredicted RBP19.56■□□□□ 0.72
UBE3C-201ENST00000348165 GLT1D1Q96MS3 346 aa19.56■□□□□ 0.72
UBE3C-201ENST00000348165 POLR1AO95602 1720 aaPredicted RBP19.56■□□□□ 0.72
UBE3C-201ENST00000348165 FRMPD1Q5SYB0 1578 aa19.56■□□□□ 0.72
UBE3C-201ENST00000348165 INO80Q9ULG1 1556 aaPredicted RBP19.56■□□□□ 0.72
UBE3C-201ENST00000348165 NFIBO00712 420 aa19.56■□□□□ 0.72
UBE3C-201ENST00000348165 PCSK1P29120 753 aa19.56■□□□□ 0.72
UBE3C-201ENST00000348165 KCTD17Q8N5Z5 321 aa19.56■□□□□ 0.72
UBE3C-201ENST00000348165 YY1AP1Q9H869 796 aa19.56■□□□□ 0.72
UBE3C-201ENST00000348165 DNAJC6O75061 913 aa19.56■□□□□ 0.72
UBE3C-201ENST00000348165 KCNJ1P48048 391 aa19.56■□□□□ 0.72
UBE3C-201ENST00000348165 ANO4Q32M45 955 aa19.56■□□□□ 0.72
UBE3C-201ENST00000348165 DIP2BQ9P265 1576 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 PRRG1O14668 218 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 HAUS5O94927 633 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 GNL1P36915 607 aaPredicted RBP19.55■□□□□ 0.72
UBE3C-201ENST00000348165 CBWD2Q8IUF1 395 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 SLC7A14Q8TBB6 771 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 GIPC2Q8TF65 315 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 LRRC37BQ96QE4 947 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 RBM12Q9NTZ6 932 aaKnown RBP19.55■□□□□ 0.72
UBE3C-201ENST00000348165 MAP3K7O43318 606 aa19.55■□□□□ 0.72
UBE3C-201ENST00000348165 LBRQ14739 615 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms