RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 GH2P01242 217 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 MYCNP04198 464 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 ARP10275 920 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 UNGP13051 313 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 RRM1P23921 792 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 HMGB2P26583 209 aaKnown RBP10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 RARRES1P49788 294 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 RBM5P52756 815 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 DRICH1Q6PGQ1 229 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 FAM47EQ6ZV65 393 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 PTF1AQ7RTS3 328 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 DENND1AQ8TEH3 1009 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 RBM41Q96IZ5 413 aaKnown RBP10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 FETUBQ9UGM5 382 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 ZNFX1Q9P2E3 1918 aaKnown RBP10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 FAM170AA1A519 330 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 DNALI1O14645 258 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 ADRB2P07550 413 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 RALAP11233 206 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 KRT15P19012 456 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 ATP6V1C1P21283 382 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 PTPN4P29074 926 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 WDR4P57081 412 aaKnown RBP10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 CEP120Q8N960 986 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 PLEKHO2Q8TD55 490 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 OSBPL1AQ9BXW6 950 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 PHACTR1Q9C0D0 580 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 DEFB129Q9H1M3 183 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 DCLRE1BQ9H816 532 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 DNAJC17Q9NVM6 304 aaKnown RBP10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 LNPEPQ9UIQ6 1025 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 TRIM33Q9UPN9 1127 aa10.73□□□□□ -0.69
TRAPPC6B-202ENST00000347691 MROH7Q68CQ1 1323 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 A6NHS1 94 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 GRIN3BO60391 1043 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 ACADSP16219 412 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 KLRC2P26717 231 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 ALDH1B1P30837 517 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 PCK1P35558 622 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 RAD23BP54727 409 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 MORF4L2Q15014 288 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 DOK7Q18PE1 504 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 CPNE8Q86YQ8 564 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 KIAA0825Q8IV33 1275 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 KIRREL3Q8IZU9 778 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 SEMA4DQ92854 862 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 C9orf72Q96LT7 481 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 MFSD14AQ96MC6 490 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 NUDCD1Q96RS6 583 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 SAYSD1Q9NPB0 183 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 PSMC3IPQ9P2W1 217 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 HERC5Q9UII4 1024 aaKnown RBP10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 SERPINA10Q9UK55 444 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 CHKBQ9Y259 395 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 UBR3Q6ZT12 1888 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 LRRD1A4D1F6 860 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 C2CD2LO14523 706 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 TOM1O60784 492 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 ZBED4O75132 1171 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 CETPP11597 493 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 PHBP35232 272 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 VPS41P49754 854 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 SEPT7Q16181 437 aaKnown RBP10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 P3H1Q32P28 736 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 ZC3H12AQ5D1E8 599 aaKnown RBP10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 FAM43BQ6ZT52 329 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 APBB1IPQ7Z5R6 666 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 MAP4K3Q8IVH8 894 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 RCOR2Q8IZ40 523 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 TBC1D22BQ9NU19 505 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 STOML1Q9UBI4 398 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 TCEAL9Q9UHQ7 104 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 ZHX2Q9Y6X8 837 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 RGPD3A6NKT7 1758 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 RGPD4Q7Z3J3 1758 aa10.72□□□□□ -0.69
TRAPPC6B-202ENST00000347691 PEX11AO75192 247 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 ECM2O94769 699 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 TPBGLP0DKB5 382 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 NPR1P16066 1061 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 CA4P22748 312 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 MARK3P27448 753 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 RXRBP28702 533 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 MCL1Q07820 350 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 DNAJC3Q13217 504 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 LBRQ14739 615 aaKnown RBP10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 EAPPQ56P03 285 aaPredicted RBP10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 WDR44Q5JSH3 913 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 STRIP1Q5VSL9 837 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 CYP4F22Q6NT55 531 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 CENPUQ71F23 418 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 MAEAQ7L5Y9 396 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 SH3BP5LQ7L8J4 393 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 PCGF5Q86SE9 256 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 LONP2Q86WA8 852 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 FAM13CQ8NE31 585 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 UTP4Q969X6 686 aaKnown RBP10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 ALKBH8Q96BT7 664 aaKnown RBP10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 SH3GL3Q99963 347 aa10.71□□□□□ -0.69
TRAPPC6B-202ENST00000347691 TLE6Q9H808 572 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms