RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 MARK2Q7KZI7 788 aaKnown RBP16.25■□□□□ 0.19
LMNA-201ENST00000347559 CCDC24Q8N4L8 307 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 GRK7Q8WTQ7 553 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 RPGRQ92834 1020 aaKnown RBP16.25■□□□□ 0.19
LMNA-201ENST00000347559 ABTB1Q969K4 478 aaPredicted RBP16.25■□□□□ 0.19
LMNA-201ENST00000347559 PTCD3Q96EY7 689 aaKnown RBP16.25■□□□□ 0.19
LMNA-201ENST00000347559 ECSITQ9BQ95 431 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 MAK16Q9BXY0 300 aaKnown RBP16.25■□□□□ 0.19
LMNA-201ENST00000347559 TRIM55Q9BYV6 548 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 KCNQ5Q9NR82 932 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 EURLQ9NYK6 297 aa16.25■□□□□ 0.19
LMNA-201ENST00000347559 H3BRJ5 948 aa16.24■□□□□ 0.19
LMNA-201ENST00000347559 SORBS3O60504 671 aa16.24■□□□□ 0.19
LMNA-201ENST00000347559 OR6B1O95007 311 aa16.24■□□□□ 0.19
LMNA-201ENST00000347559 ANPEPP15144 967 aa16.24■□□□□ 0.19
LMNA-201ENST00000347559 SLC30A10Q6XR72 485 aa16.24■□□□□ 0.19
LMNA-201ENST00000347559 ADGRF4Q8IZF3 695 aa16.24■□□□□ 0.19
LMNA-201ENST00000347559 DCLK3Q9C098 648 aa16.24■□□□□ 0.19
LMNA-201ENST00000347559 NDE1Q9NXR1 346 aa16.24■□□□□ 0.19
LMNA-201ENST00000347559 COMMD3-BMI1R4GMX3 469 aa16.24■□□□□ 0.19
LMNA-201ENST00000347559 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.24■□□□□ 0.19
LMNA-201ENST00000347559 B2RBV5 119 aa16.24■□□□□ 0.19
LMNA-201ENST00000347559 PRPF4O43172 522 aaKnown RBP eCLIP16.24■□□□□ 0.194e-6■□□□□ 10.1
LMNA-201ENST00000347559 COQ9O75208 318 aa16.24■□□□□ 0.19
LMNA-201ENST00000347559 RBM12BQ8IXT5 1001 aaKnown RBP16.24■□□□□ 0.19
LMNA-201ENST00000347559 MPP4Q96JB8 637 aa16.24■□□□□ 0.19
LMNA-201ENST00000347559 JMJD4Q9H9V9 463 aa16.24■□□□□ 0.19
LMNA-201ENST00000347559 CCDC160A6NGH7 325 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 CYP26A1O43174 497 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 BPIFB4P59827 614 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 MAP7Q14244 749 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 NOP9Q86U38 636 aaKnown RBP16.23■□□□□ 0.19
LMNA-201ENST00000347559 MYLK4Q86YV6 388 aaPredicted RBP16.23■□□□□ 0.19
LMNA-201ENST00000347559 ERMNQ8TAM6 284 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 EBF3Q9H4W6 596 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 PCIF1Q9H4Z3 704 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 CYLDQ9NQC7 956 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 TMCO1Q9UM00 188 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 DLG4P78352 724 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 MTM1Q13496 603 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 MEX3CQ5U5Q3 659 aaKnown RBP16.23■□□□□ 0.19
LMNA-201ENST00000347559 RGS9BPQ6ZS82 235 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 PSPC1Q8WXF1 523 aaKnown RBP16.23■□□□□ 0.19
LMNA-201ENST00000347559 ELMO3Q96BJ8 720 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 TMEM120AQ9BXJ8 343 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 ANAPC7Q9UJX3 599 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 SLC4A7Q9Y6M7 1214 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 DCCP43146 1447 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 ENO1P06733 434 aaKnown RBP16.23■□□□□ 0.19
LMNA-201ENST00000347559 SPATA31C1P0DKV0 1188 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 GCLMP48507 274 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 CADPS2Q86UW7 1296 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 SLC47A2Q86VL8 602 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 FBXO27Q8NI29 283 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 NAT14Q8WUY8 206 aa16.23■□□□□ 0.19
LMNA-201ENST00000347559 DDX27Q96GQ7 796 aaKnown RBP16.23■□□□□ 0.19
LMNA-201ENST00000347559 TAF1P21675 1872 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 EMSYQ7Z589 1322 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.22■□□□□ 0.19
LMNA-201ENST00000347559 PNMA6FA0A0J9YX94 578 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 USP17L10C9JJH3 530 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 hCG_1984214I3L0E3 225 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 TXNDC9O14530 226 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 RALAP11233 206 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 VAV1P15498 845 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 NOP14P78316 857 aaKnown RBP16.22■□□□□ 0.19
LMNA-201ENST00000347559 CDC16Q13042 620 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 DDB1Q16531 1140 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 C2CD6Q53TS8 623 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 SATL1Q86VE3 508 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 ZNF713Q8N859 430 aaPredicted RBP16.22■□□□□ 0.19
LMNA-201ENST00000347559 MORC4Q8TE76 937 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 OLFM3Q96PB7 478 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 THTPAQ9BU02 230 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 RABGAP1Q9Y3P9 1069 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 NEU2Q9Y3R4 380 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 GOLGA8SH3BPF8 625 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 GOLGA8MH3BSY2 632 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 BANF1O75531 89 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 HARSP12081 509 aaKnown RBP16.22■□□□□ 0.19
LMNA-201ENST00000347559 DESP17661 470 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 MAPK4P31152 587 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 KDSRQ06136 332 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 ZFYVE27Q5T4F4 411 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 RIPOR1Q6ZS17 1223 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 KCTD1Q719H9 257 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 ANKMY2Q8IV38 441 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 ZBED8Q8IZ13 594 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 ARHGAP24Q8N264 748 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 PPM1KQ8N3J5 372 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 CCDC89Q8N998 374 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 SNRNP27Q8WVK2 155 aaKnown RBP16.22■□□□□ 0.19
LMNA-201ENST00000347559 SLCO2A1Q92959 643 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 SLC17A7Q9P2U7 560 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 PAPPAQ13219 1627 aa16.22■□□□□ 0.19
LMNA-201ENST00000347559 PDLIM1O00151 329 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 ZBTB39O15060 712 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 CIB2O75838 187 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 CALCAP01258 141 aa16.21■□□□□ 0.19
LMNA-201ENST00000347559 FAM163BP0C2L3 166 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms