RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 LPIN1Q14693 890 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 TMEM132DQ14C87 1099 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 NAB2Q15742 525 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 ALKBH5Q6P6C2 394 aaKnown RBP11.79□□□□□ -0.52
ECM1-201ENST00000346569 TMEM130Q8N3G9 435 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 USP38Q8NB14 1042 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 EPS8L1Q8TE68 723 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 DDX1Q92499 740 aaKnown RBP11.79□□□□□ -0.52
ECM1-201ENST00000346569 ARID3AQ99856 593 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 AGPAT1Q99943 283 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.79□□□□□ -0.52
ECM1-201ENST00000346569 IFIH1Q9BYX4 1025 aaKnown RBP11.79□□□□□ -0.52
ECM1-201ENST00000346569 RNF208Q9H0X6 261 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 LZTFL1Q9NQ48 299 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 C1orf112Q9NSG2 853 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 NOCTQ9UK39 431 aaKnown RBP11.79□□□□□ -0.52
ECM1-201ENST00000346569 DUSP10Q9Y6W6 482 aa11.79□□□□□ -0.52
ECM1-201ENST00000346569 SMIM28A0A1B0GU29 152 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 KRT86O43790 486 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 CYP11B1P15538 503 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 TNFAIP3P21580 790 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 AKAP5P24588 427 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 CD52P31358 61 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 MNX1P50219 401 aaPredicted RBP11.78□□□□□ -0.52
ECM1-201ENST00000346569 RBP5P82980 135 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 NFX1Q12986 1120 aaKnown RBP11.78□□□□□ -0.52
ECM1-201ENST00000346569 ARHGAP29Q52LW3 1261 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 DNTTIP2Q5QJE6 756 aaKnown RBP11.78□□□□□ -0.52
ECM1-201ENST00000346569 CCDC122Q5T0U0 273 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 TWF2Q6IBS0 349 aaKnown RBP11.78□□□□□ -0.52
ECM1-201ENST00000346569 KIAA1328Q86T90 577 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 NOP9Q86U38 636 aaKnown RBP11.78□□□□□ -0.52
ECM1-201ENST00000346569 SLC47A2Q86VL8 602 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 VPS36Q86VN1 386 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 GLYCTKQ8IVS8 523 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 KIF12Q96FN5 646 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 IMPG2Q9BZV3 1241 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 TRIM6Q9C030 488 aaPredicted RBP11.78□□□□□ -0.52
ECM1-201ENST00000346569 CRISPLD2Q9H0B8 497 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 ACP6Q9NPH0 428 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 DPP3Q9NY33 737 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 MYO1AQ9UBC5 1043 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 TRIM10Q9UDY6 481 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 ITGA11Q9UKX5 1188 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 INTUQ9ULD6 942 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 AGAP1Q9UPQ3 857 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 NOD1Q9Y239 953 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 PCDHB2Q9Y5E7 798 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 ATP8B3O60423 1300 aa11.78□□□□□ -0.52
ECM1-201ENST00000346569 ANO9A1A5B4 782 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 BTNL10A8MVZ5 291 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 MGEA5O60502 916 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 ITGB3P05106 788 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 GHRP10912 638 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 GZMAP12544 262 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 USP8P40818 1118 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 GUCY2FP51841 1108 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 ZNF132P52740 706 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 BPIFB4P59827 614 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 FMO1Q01740 532 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 KIF5AQ12840 1032 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 ZNF699Q32M78 642 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 FBXO46Q6PJ61 603 aaPredicted RBP11.77□□□□□ -0.52
ECM1-201ENST00000346569 SYT10Q6XYQ8 523 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.77□□□□□ -0.52
ECM1-201ENST00000346569 FAM126BQ8IXS8 530 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 KIF18AQ8NI77 898 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 SLC20A1Q8WUM9 679 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 WDR24Q96S15 920 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 PCDHB18PQ96TA0 734 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 BCO2Q9BYV7 579 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 NIF3L1Q9GZT8 377 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 ISCUQ9H1K1 167 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 FAM105AQ9NUU6 356 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 PARP2Q9UGN5 583 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 SALL4Q9UJQ4 1053 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 GUCA1BQ9UMX6 200 aa11.77□□□□□ -0.52
ECM1-201ENST00000346569 KRT19P08727 400 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 ZSCAN20P17040 1043 aaPredicted RBP11.77□□□□□ -0.53
ECM1-201ENST00000346569 CYP3A5P20815 502 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 POLR2BP30876 1174 aaKnown RBP11.77□□□□□ -0.53
ECM1-201ENST00000346569 ASPAP45381 313 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 GNG11P61952 73 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 CDR2Q01850 454 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 MBTPS1Q14703 1052 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 WDR72Q3MJ13 1102 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 AGMOQ6ZNB7 445 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 RTN4RL1Q86UN2 441 aaPredicted RBP11.77□□□□□ -0.53
ECM1-201ENST00000346569 ZNF677Q86XU0 584 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 PALB2Q86YC2 1186 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 RPUSD2Q8IZ73 545 aaKnown RBP11.77□□□□□ -0.53
ECM1-201ENST00000346569 TXLNBQ8N3L3 684 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 RNF10Q8N5U6 811 aaKnown RBP11.77□□□□□ -0.53
ECM1-201ENST00000346569 GSTCDQ8NEC7 633 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 BEST2Q8NFU1 509 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 CAGE1Q8TC20 777 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 U2AF1L4Q8WU68 220 aaKnown RBP11.77□□□□□ -0.53
ECM1-201ENST00000346569 ZNF333Q96JL9 665 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 PACSIN1Q9BY11 444 aa11.77□□□□□ -0.53
ECM1-201ENST00000346569 TSGA10Q9BZW7 698 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms