RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 MTMR4Q9NYA4 1195 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 RGL1Q9NZL6 768 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 NYAP2Q9P242 653 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 DAGLAQ9Y4D2 1042 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 PHF2O75151 1096 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 FGFR4P22455 802 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 SNRPFP62306 86 aaKnown RBP24.23■■□□□ 1.47
NPAS3-201ENST00000346562 USP10Q14694 798 aaKnown RBP24.23■■□□□ 1.47
NPAS3-201ENST00000346562 ARID5BQ14865 1188 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 COBLL1Q53SF7 1204 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 SYTL2Q9HCH5 934 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 ESYT3A0FGR9 886 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 HNRNPRO43390 633 aaKnown RBP24.23■■□□□ 1.47
NPAS3-201ENST00000346562 CHRNA5P30532 468 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 ACOT2P49753 483 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 ALDH18A1P54886 795 aaKnown RBP24.23■■□□□ 1.47
NPAS3-201ENST00000346562 ZNF543Q08ER8 600 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 FLT1P17948 1338 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 GOLGA8TH3BQL2 631 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 HPCAP84074 193 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 CPA5Q8WXQ8 436 aa24.23■■□□□ 1.47
NPAS3-201ENST00000346562 XPO7Q9UIA9 1087 aaKnown RBP24.23■■□□□ 1.47
NPAS3-201ENST00000346562 SRP72O76094 671 aaKnown RBP24.22■■□□□ 1.47
NPAS3-201ENST00000346562 OOSP2Q86WS3 158 aa24.22■■□□□ 1.47
NPAS3-201ENST00000346562 MCEEQ96PE7 176 aa24.22■■□□□ 1.47
NPAS3-201ENST00000346562 AAASQ9NRG9 546 aa24.22■■□□□ 1.47
NPAS3-201ENST00000346562 ZNF70Q9UC06 446 aaPredicted RBP24.22■■□□□ 1.47
NPAS3-201ENST00000346562 ADGRG1Q9Y653 693 aa24.22■■□□□ 1.47
NPAS3-201ENST00000346562 TSPOAP1O95153 1857 aa24.22■■□□□ 1.47
NPAS3-201ENST00000346562 SNRNP35Q16560 246 aaKnown RBP24.22■■□□□ 1.47
NPAS3-201ENST00000346562 DGKDQ16760 1214 aa24.22■■□□□ 1.47
NPAS3-201ENST00000346562 ATF7IP2Q5U623 682 aa24.22■■□□□ 1.47
NPAS3-201ENST00000346562 PTRHD1Q6GMV3 140 aaKnown RBP24.22■■□□□ 1.47
NPAS3-201ENST00000346562 NSUN4Q96CB9 384 aaKnown RBP24.22■■□□□ 1.47
NPAS3-201ENST00000346562 ETNK1Q9HBU6 452 aa24.22■■□□□ 1.47
NPAS3-201ENST00000346562 ABCA8O94911 1581 aa24.22■■□□□ 1.47
NPAS3-201ENST00000346562 SCARF1Q14162 830 aa24.22■■□□□ 1.47
NPAS3-201ENST00000346562 MRGBPQ9NV56 204 aa24.22■■□□□ 1.47
NPAS3-201ENST00000346562 NT5C1AQ9BXI3 368 aa24.22■■□□□ 1.47
NPAS3-201ENST00000346562 PPCSQ9HAB8 311 aa24.22■■□□□ 1.47
NPAS3-201ENST00000346562 PKD2L2Q9NZM6 624 aa24.22■■□□□ 1.47
NPAS3-201ENST00000346562 ZC3H7BQ9UGR2 993 aaKnown RBP24.22■■□□□ 1.47
NPAS3-201ENST00000346562 FOXO4P98177 505 aa24.22■■□□□ 1.47
NPAS3-201ENST00000346562 PDK1Q15118 436 aa24.22■■□□□ 1.47
NPAS3-201ENST00000346562 LRRIQ3A6PVS8 624 aaPredicted RBP24.21■■□□□ 1.47
NPAS3-201ENST00000346562 PDGFRBP09619 1106 aa24.21■■□□□ 1.47
NPAS3-201ENST00000346562 EIF2B5Q13144 721 aaKnown RBP24.21■■□□□ 1.47
NPAS3-201ENST00000346562 SPATA31E1Q6ZUB1 1445 aa24.21■■□□□ 1.47
NPAS3-201ENST00000346562 GSNP06396 782 aa24.21■■□□□ 1.47
NPAS3-201ENST00000346562 MYL2P10916 166 aa24.21■■□□□ 1.47
NPAS3-201ENST00000346562 CYP2B6P20813 491 aa24.21■■□□□ 1.47
NPAS3-201ENST00000346562 NBPF20Q3BBV1 942 aa24.21■■□□□ 1.47
NPAS3-201ENST00000346562 PRUNE1Q86TP1 453 aa24.21■■□□□ 1.47
NPAS3-201ENST00000346562 SRBD1Q8N5C6 995 aaKnown RBP24.21■■□□□ 1.47
NPAS3-201ENST00000346562 CHST13Q8NET6 341 aa24.21■■□□□ 1.47
NPAS3-201ENST00000346562 ZMAT2Q96NC0 199 aaKnown RBP24.21■■□□□ 1.47
NPAS3-201ENST00000346562 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.21■■□□□ 1.47
NPAS3-201ENST00000346562 RRN3P2A6NIE6 340 aa24.21■■□□□ 1.47
NPAS3-201ENST00000346562 LRRC74AQ0VAA2 488 aa24.21■■□□□ 1.47
NPAS3-201ENST00000346562 NPM3O75607 178 aaKnown RBP24.21■■□□□ 1.47
NPAS3-201ENST00000346562 OR1G1P47890 313 aa24.21■■□□□ 1.47
NPAS3-201ENST00000346562 GPRC5AQ8NFJ5 357 aa24.21■■□□□ 1.47
NPAS3-201ENST00000346562 MRPL1Q9BYD6 325 aaKnown RBP24.21■■□□□ 1.47
NPAS3-201ENST00000346562 NDEL1Q9GZM8 345 aa24.21■■□□□ 1.47
NPAS3-201ENST00000346562 H0Y626 953 aa24.2■■□□□ 1.47
NPAS3-201ENST00000346562 TRIM16O95361 564 aa24.2■■□□□ 1.47
NPAS3-201ENST00000346562 SKOR1P84550 965 aa24.2■■□□□ 1.47
NPAS3-201ENST00000346562 SHCBP1Q8NEM2 672 aa24.2■■□□□ 1.47
NPAS3-201ENST00000346562 H2AFY2Q9P0M6 372 aaPredicted RBP24.2■■□□□ 1.47
NPAS3-201ENST00000346562 HDAC6Q9UBN7 1215 aa24.2■■□□□ 1.47
NPAS3-201ENST00000346562 ARHGEF40Q8TER5 1519 aa24.2■■□□□ 1.47
NPAS3-201ENST00000346562 APOA1P02647 267 aa24.2■■□□□ 1.46
NPAS3-201ENST00000346562 TWF1Q12792 350 aa24.2■■□□□ 1.46
NPAS3-201ENST00000346562 PLEKHA8Q96JA3 519 aa24.2■■□□□ 1.46
NPAS3-201ENST00000346562 PRMT7Q9NVM4 692 aaPredicted RBP24.2■■□□□ 1.46
NPAS3-201ENST00000346562 LRG1P02750 347 aa24.2■■□□□ 1.46
NPAS3-201ENST00000346562 PRKCEQ02156 737 aa24.2■■□□□ 1.46
NPAS3-201ENST00000346562 C16orf89Q6UX73 402 aa24.2■■□□□ 1.46
NPAS3-201ENST00000346562 SLC35G2Q8TBE7 412 aa24.2■■□□□ 1.46
NPAS3-201ENST00000346562 MOV10L1Q9BXT6 1211 aaKnown RBP24.2■■□□□ 1.46
NPAS3-201ENST00000346562 TASP1Q9H6P5 420 aa24.2■■□□□ 1.46
NPAS3-201ENST00000346562 LAMC1P11047 1609 aa24.2■■□□□ 1.46
NPAS3-201ENST00000346562 APRTP07741 180 aa24.2■■□□□ 1.46
NPAS3-201ENST00000346562 FMO5P49326 533 aa24.2■■□□□ 1.46
NPAS3-201ENST00000346562 NRKQ7Z2Y5 1582 aa24.2■■□□□ 1.46
NPAS3-201ENST00000346562 ZNF521Q96K83 1311 aa24.2■■□□□ 1.46
NPAS3-201ENST00000346562 NR3C2P08235 984 aa24.2■■□□□ 1.46
NPAS3-201ENST00000346562 EFL1Q7Z2Z2 1120 aaKnown RBP24.2■■□□□ 1.46
NPAS3-201ENST00000346562 PPP1R36Q96LQ0 422 aa24.2■■□□□ 1.46
NPAS3-201ENST00000346562 REEP2Q9BRK0 252 aa24.2■■□□□ 1.46
NPAS3-201ENST00000346562 CLASP2O75122 1294 aaKnown RBP24.19■■□□□ 1.46
NPAS3-201ENST00000346562 FAM107AO95990 144 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 AGTP01019 485 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 PNPLA4P41247 253 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 SFSWAPQ12872 951 aaKnown RBP24.19■■□□□ 1.46
NPAS3-201ENST00000346562 EFHC1Q5JVL4 640 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 CDYLQ9Y232 598 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 PDS5AQ29RF7 1337 aaKnown RBP24.19■■□□□ 1.46
NPAS3-201ENST00000346562 TEX33O43247 280 aa24.19■■□□□ 1.46
NPAS3-201ENST00000346562 ITIH2P19823 946 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms