RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 CLPTM1O96005 669 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 PSAPP07602 524 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 MYBP10242 640 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 CNTFP26441 200 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 ALDH5A1P51649 535 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 GSCP56915 257 aaPredicted RBP5.04□□□□□ -1.6
CSMD3-203ENST00000343508 TNFAIP1Q13829 316 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 PADI6Q6TGC4 694 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 SLC30A5Q8TAD4 765 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 PPP2R3CQ969Q6 453 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 GTF3C4Q9UKN8 822 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 CDY2AQ9Y6F7 541 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 CDY1Q9Y6F8 540 aa5.04□□□□□ -1.6
CSMD3-203ENST00000343508 SERPINB2P05120 415 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 CYP2D6P10635 497 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 UBXN2AP68543 259 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 ACAD10Q6JQN1 1059 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 ZNF571Q7Z3V5 609 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-203ENST00000343508 PPM1NQ8N819 430 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 AGAP11Q8TF27 550 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 EHD4Q9H223 541 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 VPS33BQ9H267 617 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 ADA2Q9NZK5 511 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 PCYOX1Q9UHG3 505 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 ZNF711Q9Y462 761 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 FLT1P17948 1338 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 TTC36A6NLP5 189 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 DNAJC6O75061 913 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 HSPA1AP0DMV8 641 aaKnown RBP5.03□□□□□ -1.6
CSMD3-203ENST00000343508 HSPA1BP0DMV9 641 aaKnown RBP5.03□□□□□ -1.6
CSMD3-203ENST00000343508 EIF3EP60228 445 aaKnown RBP5.03□□□□□ -1.6
CSMD3-203ENST00000343508 MTDHQ86UE4 582 aaKnown RBP5.03□□□□□ -1.6
CSMD3-203ENST00000343508 HDAC11Q96DB2 347 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 ACAP3Q96P50 834 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 GOLPH3Q9H4A6 298 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 OLFML3Q9NRN5 406 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 HEY2Q9UBP5 337 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 HEY1Q9Y5J3 304 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 MMP13P45452 471 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 ERVK-9P63128 1117 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 SPICE1Q8N0Z3 855 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 HSD3B7Q9H2F3 369 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 SNX5Q9Y5X3 404 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 RGPD1P0DJD0 1748 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 KRT16P08779 473 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 TFAMQ00059 246 aaKnown RBP5.03□□□□□ -1.6
CSMD3-203ENST00000343508 EPHA7Q15375 998 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 MIIPQ5JXC2 388 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 MTMR4Q9NYA4 1195 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 CTNNAL1Q9UBT7 734 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 PCDHA3Q9Y5H8 950 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 SYCE1LA8MT33 242 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 PDE2AO00408 941 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-203ENST00000343508 KCNN4O15554 427 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 APRTP07741 180 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 ATP6V1C1P21283 382 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 R3HDM1Q15032 1099 aaKnown RBP5.03□□□□□ -1.6
CSMD3-203ENST00000343508 MOXD1Q6UVY6 613 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 HAUS6Q7Z4H7 955 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 TMPRSS6Q8IU80 811 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 ANKMY2Q8IV38 441 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 JDP2Q8WYK2 163 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 C11orf70Q9BRQ4 267 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 SEMA4AQ9H3S1 761 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 CCNG2Q16589 344 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 TMEM259Q4ZIN3 620 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 PRUNE1Q86TP1 453 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 E2F7Q96AV8 911 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 CPVLQ9H3G5 476 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 HSPBP1Q9NZL4 362 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 SPATA31A3Q5VYP0 1347 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 H0YIN7 160 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 TNFAIP8O95379 198 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 SNRPAP09012 282 aaKnown RBP5.03□□□□□ -1.6
CSMD3-203ENST00000343508 TYK2P29597 1187 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 GSTA3Q16772 222 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 SLC44A4Q53GD3 710 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 KIAA0825Q8IV33 1275 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 EXD1Q8NHP7 514 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 CKAP2Q8WWK9 683 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 BTBD6Q96KE9 485 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 C9orf72Q96LT7 481 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 TMEM237Q96Q45 408 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 SLC4A7Q9Y6M7 1214 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 LRRC37A3O60309 1634 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 MYL2P10916 166 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 CD58P19256 250 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 PRKCIP41743 596 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 STX3Q13277 289 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 SNRNP35Q16560 246 aaKnown RBP5.03□□□□□ -1.6
CSMD3-203ENST00000343508 IRGCQ6NXR0 463 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.03□□□□□ -1.6
CSMD3-203ENST00000343508 GIPC2Q8TF65 315 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 DUSP9Q99956 384 aaKnown RBP5.03□□□□□ -1.6
CSMD3-203ENST00000343508 FAM217BQ9NTX9 383 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-203ENST00000343508 SNAP23O00161 211 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 CNBD2Q96M20 576 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 FAM213AQ9BRX8 229 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 MYLK2Q9H1R3 596 aa5.03□□□□□ -1.6
CSMD3-203ENST00000343508 SIK3Q9Y2K2 1263 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms