RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 NOS3P29474 1203 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 PLEKHA7Q6IQ23 1121 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 ERAP2Q6P179 960 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 WNK4Q96J92 1243 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 NPHS2Q9NP85 383 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 GSTM1P09488 218 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 VCLP18206 1134 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 RPS6P62753 249 aaKnown RBP18.44■□□□□ 0.54
SMAD4-201ENST00000342988 CCDC157Q569K6 752 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 MGAT4AQ9UM21 535 aa18.44■□□□□ 0.54
SMAD4-201ENST00000342988 TRPC5OSA6NMA1 111 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 CACTIN-AS1Q8N1I8 211 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 RIN3Q8TB24 985 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 FAM153AQ9UHL3 310 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 ADGRL1O94910 1474 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 SMIM22K7EJ46 135 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 ALOX15P16050 662 aaPredicted RBP18.43■□□□□ 0.54
SMAD4-201ENST00000342988 MYL12AP19105 171 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 PYHIN1Q6K0P9 492 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 PALMO75781 387 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 C19orf44Q9H6X5 657 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 ACADSP16219 412 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 TIMM10P62072 90 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 MRPS25P82663 173 aaKnown RBP18.43■□□□□ 0.54
SMAD4-201ENST00000342988 PDIA2Q13087 525 aaKnown RBP18.43■□□□□ 0.54
SMAD4-201ENST00000342988 KIZQ2M2Z5 673 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 ENOSF1Q7L5Y1 443 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 SOWAHDA6NJG2 315 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 SERPINB9P50453 376 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 TGM3Q08188 693 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 AP3B2Q13367 1082 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 CCDC36Q8IYA8 594 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 ARHGEF38Q9NXL2 777 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 JAK2O60674 1132 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 CYP2C19P33261 490 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 SUZ12Q15022 739 aaKnown RBP18.43■□□□□ 0.54
SMAD4-201ENST00000342988 DNAJC9Q8WXX5 260 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 ATP6V1G3Q96LB4 118 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 PRMT1Q99873 361 aaKnown RBP18.43■□□□□ 0.54
SMAD4-201ENST00000342988 THTPAQ9BU02 230 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 RMND5AQ9H871 391 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 AQRO60306 1485 aaKnown RBP eCLIP18.43■□□□□ 0.541e-6■■■■□ 21
SMAD4-201ENST00000342988 GCLCP48506 637 aaPredicted RBP18.43■□□□□ 0.54
SMAD4-201ENST00000342988 AGR3Q8TD06 166 aa18.43■□□□□ 0.54
SMAD4-201ENST00000342988 RANBP17Q9H2T7 1088 aaKnown RBP18.43■□□□□ 0.54
SMAD4-201ENST00000342988 ZMYM4Q5VZL5 1548 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 RASSF6Q6ZTQ3 369 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 MAGED4Q96JG8 741 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 NME3Q13232 169 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 CYP51A1Q16850 503 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 LRRC36Q1X8D7 754 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 LSM7Q9UK45 103 aaKnown RBP18.42■□□□□ 0.54
SMAD4-201ENST00000342988 TRIM43BA6NCK2 446 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 TM9SF1O15321 606 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 CLTBP09497 229 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 CPA1P15085 419 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 MAPK1P28482 360 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 PPP2R1BP30154 601 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 GRK3P35626 688 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 SMCO1Q147U7 214 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 ZSWIM7Q19AV6 140 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 COBLL1Q53SF7 1204 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 POLR3EQ9NVU0 708 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 XPO1O14980 1071 aaKnown RBP18.42■□□□□ 0.54
SMAD4-201ENST00000342988 SEMA3EO15041 775 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 TWF2Q6IBS0 349 aaKnown RBP18.42■□□□□ 0.54
SMAD4-201ENST00000342988 FAM135BQ49AJ0 1406 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 A0A087X0T9 212 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 FAM187AA6NFU0 413 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 GCKRQ14397 625 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 CHSY1Q86X52 802 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 CDK20Q8IZL9 346 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 RNF26Q9BY78 433 aaPredicted RBP18.42■□□□□ 0.54
SMAD4-201ENST00000342988 A0A0X1KG70 313 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 C3orf70A6NLC5 250 aaPredicted RBP18.42■□□□□ 0.54
SMAD4-201ENST00000342988 BCAR1P56945 870 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 VN1R5Q7Z5H4 357 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 ZNF513Q8N8E2 541 aaPredicted RBP18.42■□□□□ 0.54
SMAD4-201ENST00000342988 HPS4Q9NQG7 708 aa18.42■□□□□ 0.54
SMAD4-201ENST00000342988 GMFBP60983 142 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 FCHO2Q0JRZ9 810 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 ENO4A6NNW6 628 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 CLIC2O15247 247 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 MARK3P27448 753 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 CDK17Q00537 523 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 JADE3Q92613 823 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.41■□□□□ 0.54
SMAD4-201ENST00000342988 KRT34O76011 436 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 HSMCR30P0CW71 290 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 PWP1Q13610 501 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 FLAD1Q8NFF5 587 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 GPKOWQ92917 476 aaPredicted RBP eCLIP18.41■□□□□ 0.545e-7■■■□□ 17.4
SMAD4-201ENST00000342988 STK39Q9UEW8 545 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 AKIRIN2Q53H80 203 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 SLFN13Q68D06 897 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 EPHX4Q8IUS5 362 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 HSD3B2P26439 372 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 OSTNP61366 133 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 LLGL1Q15334 1064 aa18.41■□□□□ 0.54
SMAD4-201ENST00000342988 SPATA21Q7Z572 469 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms