RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 FTLP02792 175 aaPredicted RBP13.95□□□□□ -0.18
COL18A1-201ENST00000342220 FAM153BP0C7A2 387 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 GALCP54803 685 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 SLC18A3Q16572 532 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 FSCN1Q16658 493 aaKnown RBP13.95□□□□□ -0.18
COL18A1-201ENST00000342220 FAM153CQ494X1 144 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 TDRD10Q5VZ19 366 aaKnown RBP13.95□□□□□ -0.18
COL18A1-201ENST00000342220 GTF3C2Q8WUA4 911 aaPredicted RBP13.95□□□□□ -0.18
COL18A1-201ENST00000342220 RUFY1Q96T51 708 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 CAPS2Q9BXY5 557 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 NIFKQ9BYG3 293 aaKnown RBP13.95□□□□□ -0.18
COL18A1-201ENST00000342220 STK33Q9BYT3 514 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 IRAK4Q9NWZ3 460 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 FAM153AQ9UHL3 310 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 DIS3Q9Y2L1 958 aaKnown RBP13.95□□□□□ -0.18
COL18A1-201ENST00000342220 KIAA1217Q5T5P2 1943 aa13.95□□□□□ -0.18
COL18A1-201ENST00000342220 MYH9P35579 1960 aaKnown RBP13.95□□□□□ -0.18
COL18A1-201ENST00000342220 GOLGA8KD6RF30 607 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 HSF2BPO75031 334 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 SKAP2O75563 359 aaPredicted RBP13.94□□□□□ -0.18
COL18A1-201ENST00000342220 GJB6O95452 261 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 SMIM10L2AP0DMW4 78 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 SMIM10L2BP0DMW5 78 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 FERP16591 822 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 IRX1P78414 480 aaPredicted RBP13.94□□□□□ -0.18
COL18A1-201ENST00000342220 GUCY2DQ02846 1103 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 NAB2Q15742 525 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 DAB2IPQ5VWQ8 1189 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 AP1ARQ63HQ0 302 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 SLFN12LQ6IEE8 588 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 KCTD17Q8N5Z5 321 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 PPTC7Q8NI37 304 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 ZIM3Q96PE6 472 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 C17orf75Q9HAS0 396 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 EPB41L5Q9HCM4 733 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 MORF4L1Q9UBU8 362 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 NAGPAQ9UK23 515 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 GPR25O00155 361 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 DDX3XO00571 662 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL18A1-201ENST00000342220 CEP104O60308 925 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 OPA1O60313 960 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 HEXIM1O94992 359 aaKnown RBP13.94□□□□□ -0.18
COL18A1-201ENST00000342220 PDE6CP51160 858 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 GNGT1P63211 74 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 ZNF211Q13398 564 aaPredicted RBP13.94□□□□□ -0.18
COL18A1-201ENST00000342220 C1orf220Q5T0J3 134 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 MTHFD1LQ6UB35 978 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 IRF2BP2Q7Z5L9 587 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 KLHL7Q8IXQ5 586 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 SYN2Q92777 582 aaPredicted RBP13.94□□□□□ -0.18
COL18A1-201ENST00000342220 KREMEN1Q96MU8 473 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 KRT12Q99456 494 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 C16orf70Q9BSU1 422 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 TMEM8AQ9HCN3 771 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 ZBTB42B2RXF5 422 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 CSPG5O95196 566 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 ITGB3P05106 788 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 GPC3P51654 580 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 FCGRTP55899 365 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 MFSD10Q14728 455 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 TRADDQ15628 312 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 KCTD16Q68DU8 428 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 FOXR2Q6PJQ5 311 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 SH2D3CQ8N5H7 860 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 SLC17A8Q8NDX2 589 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 CAVIN3Q969G5 261 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 BORCS6Q96GS4 357 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 THAP2Q9H0W7 228 aa13.94□□□□□ -0.18
COL18A1-201ENST00000342220 NUCKS1Q9H1E3 243 aaKnown RBP13.94□□□□□ -0.18
COL18A1-201ENST00000342220 ZEB2O60315 1214 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 C22orf31O95567 290 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 KRT14P02533 472 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 PRKAR2AP13861 404 aaKnown RBP13.93□□□□□ -0.18
COL18A1-201ENST00000342220 ARF4P18085 180 aaPredicted RBP13.93□□□□□ -0.18
COL18A1-201ENST00000342220 CCNHP51946 323 aaPredicted RBP13.93□□□□□ -0.18
COL18A1-201ENST00000342220 EFNA5P52803 228 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 NOP14P78316 857 aaKnown RBP13.93□□□□□ -0.18
COL18A1-201ENST00000342220 TARBP2Q15633 366 aaKnown RBP13.93□□□□□ -0.18
COL18A1-201ENST00000342220 PAN2Q504Q3 1202 aaKnown RBP13.93□□□□□ -0.18
COL18A1-201ENST00000342220 MFSD14CQ5VZR4 134 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 RUFY4Q6ZNE9 571 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 PLPPR4Q7Z2D5 763 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 SNTG2Q9NY99 539 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 MCM8Q9UJA3 840 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 POLIQ9UNA4 740 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 CAND2O75155 1236 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 TNNC2P02585 160 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 NFICP08651 508 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 SLC10A3P09131 477 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 STAG3L1P0CL83 205 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 RARBP10826 455 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 CLNS1AP54105 237 aaKnown RBP13.93□□□□□ -0.18
COL18A1-201ENST00000342220 IQSEC1Q6DN90 963 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 IFT20Q8IY31 132 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 TRIB2Q92519 343 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 KIF12Q96FN5 646 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 C11orf70Q9BRQ4 267 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 SYNCQ9H7C4 482 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 PDLIM7Q9NR12 457 aa13.93□□□□□ -0.18
COL18A1-201ENST00000342220 INPP5FQ9Y2H2 1132 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms