RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 PCDHB13Q9Y5F0 798 aa21.91■■□□□ 1.1
SYNE2-201ENST00000341472 STYXL1Q9Y6J8 313 aa21.91■■□□□ 1.1
SYNE2-201ENST00000341472 ZFP37Q9Y6Q3 630 aaPredicted RBP21.91■■□□□ 1.1
SYNE2-201ENST00000341472 A0A087X0B3 334 aa21.9■■□□□ 1.1
SYNE2-201ENST00000341472 ABLIM3O94929 683 aa21.9■■□□□ 1.1
SYNE2-201ENST00000341472 YEATS4O95619 227 aa21.9■■□□□ 1.1
SYNE2-201ENST00000341472 PDGFBP01127 241 aaPredicted RBP21.9■■□□□ 1.1
SYNE2-201ENST00000341472 POU2F2P09086 479 aa21.9■■□□□ 1.1
SYNE2-201ENST00000341472 ZSCAN22P10073 491 aaPredicted RBP21.9■■□□□ 1.1
SYNE2-201ENST00000341472 AVPR2P30518 371 aa21.9■■□□□ 1.1
SYNE2-201ENST00000341472 NTHL1P78549 312 aa21.9■■□□□ 1.1
SYNE2-201ENST00000341472 ROR1Q01973 937 aa21.9■■□□□ 1.1
SYNE2-201ENST00000341472 SPATA1Q5VX52 437 aa21.9■■□□□ 1.1
SYNE2-201ENST00000341472 BEST2Q8NFU1 509 aa21.9■■□□□ 1.1
SYNE2-201ENST00000341472 ACCSQ96QU6 501 aa21.9■■□□□ 1.1
SYNE2-201ENST00000341472 STRA6Q9BX79 667 aa21.9■■□□□ 1.1
SYNE2-201ENST00000341472 TISP43B9A030 160 aa21.89■■□□□ 1.09
SYNE2-201ENST00000341472 PPP1R37O75864 691 aa21.89■■□□□ 1.09
SYNE2-201ENST00000341472 GUCY2FP51841 1108 aa21.89■■□□□ 1.09
SYNE2-201ENST00000341472 POU5F1Q01860 360 aaKnown RBP21.89■■□□□ 1.09
SYNE2-201ENST00000341472 IER5LQ5T953 404 aa21.89■■□□□ 1.09
SYNE2-201ENST00000341472 TPGS2Q68CL5 300 aa21.89■■□□□ 1.09
SYNE2-201ENST00000341472 JADE1Q6IE81 842 aa21.89■■□□□ 1.09
SYNE2-201ENST00000341472 DSTYKQ6XUX3 929 aa21.89■■□□□ 1.09
SYNE2-201ENST00000341472 TMEM130Q8N3G9 435 aa21.89■■□□□ 1.09
SYNE2-201ENST00000341472 SLC44A3Q8N4M1 653 aa21.89■■□□□ 1.09
SYNE2-201ENST00000341472 RSAD2Q8WXG1 361 aa21.89■■□□□ 1.09
SYNE2-201ENST00000341472 POMGNT1Q8WZA1 660 aa21.89■■□□□ 1.09
SYNE2-201ENST00000341472 PRRX2Q99811 253 aa21.89■■□□□ 1.09
SYNE2-201ENST00000341472 LRRC27Q9C0I9 530 aa21.89■■□□□ 1.09
SYNE2-201ENST00000341472 ASB7Q9H672 318 aa21.89■■□□□ 1.09
SYNE2-201ENST00000341472 PANK4Q9NVE7 773 aa21.89■■□□□ 1.09
SYNE2-201ENST00000341472 DERAQ9Y315 318 aa21.89■■□□□ 1.09
SYNE2-201ENST00000341472 WDR27A2RRH5 827 aa21.88■■□□□ 1.09
SYNE2-201ENST00000341472 M0QZQ0 153 aa21.88■■□□□ 1.09
SYNE2-201ENST00000341472 PRRG1O14668 218 aa21.88■■□□□ 1.09
SYNE2-201ENST00000341472 CUTAO60888 179 aa21.88■■□□□ 1.09
SYNE2-201ENST00000341472 GCNT3O95395 438 aa21.88■■□□□ 1.09
SYNE2-201ENST00000341472 ATF2P15336 505 aa21.88■■□□□ 1.09
SYNE2-201ENST00000341472 PAX3P23760 479 aa21.88■■□□□ 1.09
SYNE2-201ENST00000341472 FOXD4L6Q3SYB3 417 aaPredicted RBP21.88■■□□□ 1.09
SYNE2-201ENST00000341472 ZNF280DQ6N043 979 aa21.88■■□□□ 1.09
SYNE2-201ENST00000341472 FOXD4L3Q6VB84 417 aaPredicted RBP21.88■■□□□ 1.09
SYNE2-201ENST00000341472 USP37Q86T82 979 aa21.88■■□□□ 1.09
SYNE2-201ENST00000341472 IKZF4Q9H2S9 585 aa21.88■■□□□ 1.09
SYNE2-201ENST00000341472 CYP4F11Q9HBI6 524 aa21.88■■□□□ 1.09
SYNE2-201ENST00000341472 OLFML3Q9NRN5 406 aa21.88■■□□□ 1.09
SYNE2-201ENST00000341472 DNMT3BQ9UBC3 853 aaKnown RBP21.88■■□□□ 1.09
SYNE2-201ENST00000341472 CDH7Q9ULB5 785 aa21.88■■□□□ 1.09
SYNE2-201ENST00000341472 DUSP12Q9UNI6 340 aa21.88■■□□□ 1.09
SYNE2-201ENST00000341472 OAZ2O95190 189 aa21.87■■□□□ 1.09
SYNE2-201ENST00000341472 ADSSP30520 456 aa21.87■■□□□ 1.09
SYNE2-201ENST00000341472 AARSP49588 968 aaKnown RBP eCLIP21.87■■□□□ 1.09
SYNE2-201ENST00000341472 VCPP55072 806 aaKnown RBP21.87■■□□□ 1.09
SYNE2-201ENST00000341472 YWHAHQ04917 246 aaPredicted RBP21.87■■□□□ 1.09
SYNE2-201ENST00000341472 KCNA1Q09470 495 aa21.87■■□□□ 1.09
SYNE2-201ENST00000341472 TMEM132DQ14C87 1099 aa21.87■■□□□ 1.09
SYNE2-201ENST00000341472 L1TD1Q5T7N2 865 aaKnown RBP21.87■■□□□ 1.09
SYNE2-201ENST00000341472 CCDC65Q8IXS2 484 aa21.87■■□□□ 1.09
SYNE2-201ENST00000341472 TCEAL8Q8IYN2 117 aa21.87■■□□□ 1.09
SYNE2-201ENST00000341472 SYCP3Q8IZU3 236 aa21.87■■□□□ 1.09
SYNE2-201ENST00000341472 SPRYD3Q8NCJ5 442 aa21.87■■□□□ 1.09
SYNE2-201ENST00000341472 OXCT2Q9BYC2 517 aaPredicted RBP21.87■■□□□ 1.09
SYNE2-201ENST00000341472 MFSD1Q9H3U5 465 aa21.87■■□□□ 1.09
SYNE2-201ENST00000341472 FBXL21Q9UKT6 434 aa21.87■■□□□ 1.09
SYNE2-201ENST00000341472 KCNH3Q9ULD8 1083 aa21.87■■□□□ 1.09
SYNE2-201ENST00000341472 MAFFQ9ULX9 164 aa21.87■■□□□ 1.09
SYNE2-201ENST00000341472 TIMM13Q9Y5L4 95 aaPredicted RBP21.87■■□□□ 1.09
SYNE2-201ENST00000341472 ARHGEF37A1IGU5 675 aa21.86■■□□□ 1.09
SYNE2-201ENST00000341472 FRMD3A2A2Y4 597 aa21.86■■□□□ 1.09
SYNE2-201ENST00000341472 ANHXE9PGG2 379 aa21.86■■□□□ 1.09
SYNE2-201ENST00000341472 F13A1P00488 732 aa21.86■■□□□ 1.09
SYNE2-201ENST00000341472 LRG1P02750 347 aa21.86■■□□□ 1.09
SYNE2-201ENST00000341472 NFICP08651 508 aa21.86■■□□□ 1.09
SYNE2-201ENST00000341472 LILRA4P59901 499 aa21.86■■□□□ 1.09
SYNE2-201ENST00000341472 AMPD3Q01432 767 aa21.86■■□□□ 1.09
SYNE2-201ENST00000341472 ALCAMQ13740 583 aa21.86■■□□□ 1.09
SYNE2-201ENST00000341472 PABPC1LQ4VXU2 614 aaKnown RBP21.86■■□□□ 1.09
SYNE2-201ENST00000341472 IQUBQ8NA54 791 aa21.86■■□□□ 1.09
SYNE2-201ENST00000341472 ITFG1Q8TB96 612 aa21.86■■□□□ 1.09
SYNE2-201ENST00000341472 FGF13Q92913 245 aa21.86■■□□□ 1.09
SYNE2-201ENST00000341472 CUEDC2Q9H467 287 aa21.86■■□□□ 1.09
SYNE2-201ENST00000341472 HCFC1R1Q9NWW0 138 aa21.86■■□□□ 1.09
SYNE2-201ENST00000341472 AFF4Q9UHB7 1163 aaKnown RBP21.86■■□□□ 1.09
SYNE2-201ENST00000341472 MYO10Q9HD67 2058 aa21.86■■□□□ 1.09
SYNE2-201ENST00000341472 TULP1O00294 542 aaPredicted RBP21.85■■□□□ 1.09
SYNE2-201ENST00000341472 NARSO43776 548 aaKnown RBP21.85■■□□□ 1.09
SYNE2-201ENST00000341472 SEC24AO95486 1093 aa21.85■■□□□ 1.09
SYNE2-201ENST00000341472 PTPN2P17706 415 aa21.85■■□□□ 1.09
SYNE2-201ENST00000341472 C9orf57Q5W0N0 161 aa21.85■■□□□ 1.09
SYNE2-201ENST00000341472 ATL3Q6DD88 541 aa21.85■■□□□ 1.09
SYNE2-201ENST00000341472 SHC4Q6S5L8 630 aa21.85■■□□□ 1.09
SYNE2-201ENST00000341472 CRELD2Q6UXH1 353 aaPredicted RBP21.85■■□□□ 1.09
SYNE2-201ENST00000341472 KCNG4Q8TDN1 519 aa21.85■■□□□ 1.09
SYNE2-201ENST00000341472 DHX58Q96C10 678 aa21.85■■□□□ 1.09
SYNE2-201ENST00000341472 TNMDQ9H2S6 317 aa21.85■■□□□ 1.09
SYNE2-201ENST00000341472 KBTBD4Q9NVX7 518 aa21.85■■□□□ 1.09
SYNE2-201ENST00000341472 MRPS23Q9Y3D9 190 aaKnown RBP21.85■■□□□ 1.09
SYNE2-201ENST00000341472 C2CD2Q9Y426 696 aa21.85■■□□□ 1.09
SYNE2-201ENST00000341472 PIRO00625 290 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms