RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 KCNK3O14649 394 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 PSMG1O95456 288 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 FCER1AP12319 257 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 ITGA4P13612 1032 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 CREB1P16220 341 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 KLRC1P26715 233 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 RGS2P41220 211 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 SLC29A2Q14542 456 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 FAM83BQ5T0W9 1011 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 C6orf118Q5T5N4 469 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 ZNF449Q6P9G9 518 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 ST13P4Q8IZP2 240 aaPredicted RBP12.57□□□□□ -0.4
RTN3-203ENST00000341307 PPFIBP2Q8ND30 876 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 DTX3LQ8TDB6 740 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 ERGIC2Q96RQ1 377 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 MIPEPQ99797 713 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 ANO3Q9BYT9 981 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 TRIM9Q9C026 710 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 AIPL1Q9NZN9 384 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 DBR1Q9UK59 544 aaKnown RBP12.57□□□□□ -0.4
RTN3-203ENST00000341307 ZBTB21Q9ULJ3 1066 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 PRR12Q9ULL5 1215 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 UMODL1Q5DID0 1318 aa12.57□□□□□ -0.4
RTN3-203ENST00000341307 TMEM110-MUSTN1A8MSY1 372 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 CES2O00748 559 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 VILLO15195 856 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 MARCH6O60337 910 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 CBX6O95503 412 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 STIP1P31948 543 aaKnown RBP12.56□□□□□ -0.4
RTN3-203ENST00000341307 SLCO1A2P46721 670 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 FXR2P51116 673 aaKnown RBP eCLIP12.56□□□□□ -0.4
RTN3-203ENST00000341307 USP11P51784 963 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 POLGP54098 1239 aaPredicted RBP12.56□□□□□ -0.4
RTN3-203ENST00000341307 PMS2P54278 862 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 ASIC1P78348 528 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 DCTN2Q13561 401 aaKnown RBP12.56□□□□□ -0.4
RTN3-203ENST00000341307 AUHQ13825 339 aaKnown RBP12.56□□□□□ -0.4
RTN3-203ENST00000341307 MTFR1Q15390 333 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 DENND2CQ68D51 928 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 VSTM1Q6UX27 236 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 DYMQ7RTS9 669 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 FBXO11Q86XK2 927 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 NELFCDQ8IXH7 590 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 ACTRT1Q8TDG2 376 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 SNX29Q8TEQ0 813 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 CALML4Q96GE6 196 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 NAP1L3Q99457 506 aaPredicted RBP12.56□□□□□ -0.4
RTN3-203ENST00000341307 AMNQ9BXJ7 453 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 BLOC1S4Q9NUP1 217 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 STX18Q9P2W9 335 aaKnown RBP12.56□□□□□ -0.4
RTN3-203ENST00000341307 SMCHD1A6NHR9 2005 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 SMIM31A0A1B0GVY4 71 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 SPTLC1O15269 473 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 ZBTB48P10074 688 aaPredicted RBP12.56□□□□□ -0.4
RTN3-203ENST00000341307 EPHX2P34913 555 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 VPS41P49754 854 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 NEK2P51955 445 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 PDE4DQ08499 809 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 STK4Q13043 487 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 NAB2Q15742 525 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 TMEM266Q2M3C6 531 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 ZNF280DQ6N043 979 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 MAML3Q96JK9 1138 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 TRIM51Q9BSJ1 452 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 EPB41L1Q9H4G0 881 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 METTL14Q9HCE5 456 aaKnown RBP12.56□□□□□ -0.4
RTN3-203ENST00000341307 MYOZ2Q9NPC6 264 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 ZDHHC18Q9NUE0 388 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 DDX18Q9NVP1 670 aaKnown RBP12.56□□□□□ -0.4
RTN3-203ENST00000341307 MAGEC2Q9UBF1 373 aaPredicted RBP12.56□□□□□ -0.4
RTN3-203ENST00000341307 RASAL2Q9UJF2 1139 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 FAM32AQ9Y421 112 aaKnown RBP12.56□□□□□ -0.4
RTN3-203ENST00000341307 WASF2Q9Y6W5 498 aa12.56□□□□□ -0.4
RTN3-203ENST00000341307 TMEM120BA0PK00 339 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 LRRC53A6NM62 1247 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 GH1P01241 217 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 STAT3P40763 770 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 YARSP54577 528 aaKnown RBP12.55□□□□□ -0.4
RTN3-203ENST00000341307 DGKZQ13574 1117 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 NEPROQ6NW34 567 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 CCDC174Q6PII3 467 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 AGBL3Q8NEM8 1001 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 GDAP1Q8TB36 358 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 TRIM47Q96LD4 638 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 TRIM31Q9BZY9 425 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 CUEDC2Q9H467 287 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 USP29Q9HBJ7 922 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 NOC2LQ9Y3T9 749 aaKnown RBP12.55□□□□□ -0.4
RTN3-203ENST00000341307 COL2A1P02458 1487 aaPredicted RBP12.55□□□□□ -0.4
RTN3-203ENST00000341307 MYMKA6NI61 221 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 RBAK-RBAKDNI3L0D1 243 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 PDE5AO76074 875 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 RHOBTB3O94955 611 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 CCR3P51677 355 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 MAP3K10Q02779 954 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 MAP1SQ66K74 1059 aaPredicted RBP12.55□□□□□ -0.4
RTN3-203ENST00000341307 TTI2Q6NXR4 508 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 B3GNT6Q6ZMB0 384 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 Q6ZNX1 250 aa12.55□□□□□ -0.4
RTN3-203ENST00000341307 ZBED8Q8IZ13 594 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms