RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 TCHPQ9BT92 498 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 LRRIQ4A6NIV6 560 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 YDJCA8MPS7 323 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 CAP2P40123 477 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 MSH2P43246 934 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 ARSEP51690 589 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 IL9RQ01113 521 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 OVGP1Q12889 678 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 SETDB1Q15047 1291 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 PKN2Q16513 984 aaKnown RBP15.28■□□□□ 0.04
CPSF7-201ENST00000340437 LIN9Q5TKA1 542 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 SUPT20HQ8NEM7 779 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 STRA6Q9BX79 667 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 SGK1O00141 431 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 P4HA2O15460 535 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 KRT1P04264 644 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 PSMC5P62195 406 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 WLSQ5T9L3 541 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 HHATQ5VTY9 493 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 SCARA3Q6AZY7 606 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 DCUN1D2Q6PH85 259 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 A1CFQ9NQ94 594 aaKnown RBP15.28■□□□□ 0.04
CPSF7-201ENST00000340437 DNPEPQ9ULA0 475 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 NEU2Q9Y3R4 380 aa15.28■□□□□ 0.04
CPSF7-201ENST00000340437 TP73O15350 636 aa15.27■□□□□ 0.04
CPSF7-201ENST00000340437 HLA-DRAP01903 254 aa15.27■□□□□ 0.04
CPSF7-201ENST00000340437 RPL7AP62424 266 aaKnown RBP15.27■□□□□ 0.04
CPSF7-201ENST00000340437 CYP24A1Q07973 514 aa15.27■□□□□ 0.04
CPSF7-201ENST00000340437 SCARA5Q6ZMJ2 495 aa15.27■□□□□ 0.04
CPSF7-201ENST00000340437 ANO5Q75V66 913 aa15.27■□□□□ 0.04
CPSF7-201ENST00000340437 COL24A1Q17RW2 1714 aa15.27■□□□□ 0.04
CPSF7-201ENST00000340437 LRRD1A4D1F6 860 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 KLRG2A4D1S0 409 aaPredicted RBP15.27■□□□□ 0.03
CPSF7-201ENST00000340437 DSG3P32926 999 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 HADHBP55084 474 aaKnown RBP15.27■□□□□ 0.03
CPSF7-201ENST00000340437 STRN3Q13033 797 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 CYP1B1Q16678 543 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 SMTNL2Q2TAL5 461 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 ECHDC2Q86YB7 292 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 SYTL5Q8TDW5 730 aaPredicted RBP15.27■□□□□ 0.03
CPSF7-201ENST00000340437 MORC4Q8TE76 937 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 FBF1Q8TES7 1133 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 IWS1Q96ST2 819 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 HERC5Q9UII4 1024 aaKnown RBP15.27■□□□□ 0.03
CPSF7-201ENST00000340437 TRPC5Q9UL62 973 aaPredicted RBP15.27■□□□□ 0.03
CPSF7-201ENST00000340437 NRAPQ86VF7 1730 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 CDH16O75309 829 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 POTEJP0CG39 1038 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 GNA15P30679 374 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 PCNX4Q63HM2 1172 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 GPD1LQ8N335 351 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 CCDC89Q8N998 374 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.27■□□□□ 0.03
CPSF7-201ENST00000340437 DDX1Q92499 740 aaKnown RBP15.27■□□□□ 0.03
CPSF7-201ENST00000340437 TRABDQ9H4I3 376 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 FEM1BQ9UK73 627 aa15.27■□□□□ 0.03
CPSF7-201ENST00000340437 CFAP73A6NFT4 308 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 MYBL1P10243 752 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 IVDP26440 423 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 CETN2P41208 172 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 WNT7BP56706 349 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 MGAT5Q09328 741 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 MIS18BP1Q6P0N0 1132 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 SLC39A4Q6P5W5 647 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 ANKRD35Q8N283 1001 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 ZNF516Q92618 1163 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 TMEM121Q9BTD3 319 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 MYLK2Q9H1R3 596 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 ZWILCHQ9H900 591 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 NOP53Q9NZM5 478 aaKnown RBP15.26■□□□□ 0.03
CPSF7-201ENST00000340437 UMODL1Q5DID0 1318 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 A0A1W2PPM1 405 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 CBX6O95503 412 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 GSTA1P08263 222 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 PDIA2Q13087 525 aaKnown RBP15.26■□□□□ 0.03
CPSF7-201ENST00000340437 ZBTB41Q5SVQ8 909 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 ZBTB33Q86T24 672 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 USP37Q86T82 979 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 FAM160B2Q86V87 743 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 RHOT1Q8IXI2 618 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 ADGRA3Q8IWK6 1321 aa15.26■□□□□ 0.03
CPSF7-201ENST00000340437 WDR64B1ANS9 1081 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 NLRP11P59045 1033 aaKnown RBP15.25■□□□□ 0.03
CPSF7-201ENST00000340437 ALCAMQ13740 583 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 BAATQ14032 418 aaPredicted RBP15.25■□□□□ 0.03
CPSF7-201ENST00000340437 MFSD5Q6N075 450 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 LRRC8CQ8TDW0 803 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 DDX27Q96GQ7 796 aaKnown RBP15.25■□□□□ 0.03
CPSF7-201ENST00000340437 PHTF1Q9UMS5 762 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 PCNTO95613 3336 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 SPDYE2BA6NHP3 402 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 FAM47DPA6NHR8 397 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 GRIN3BO60391 1043 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 SPDYE6P0CI01 402 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 RPA3P35244 121 aaPredicted RBP15.25■□□□□ 0.03
CPSF7-201ENST00000340437 WDR4P57081 412 aaKnown RBP15.25■□□□□ 0.03
CPSF7-201ENST00000340437 PTK6Q13882 451 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 KCNT1Q5JUK3 1230 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 RFX8Q6ZV50 586 aa15.25■□□□□ 0.03
CPSF7-201ENST00000340437 SMC6Q96SB8 1091 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms