RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 YIPF3Q9GZM5 350 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 ZFP69BQ9UJL9 534 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 PNMA3Q9UL41 463 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 CHMP2BQ9UQN3 213 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 FSBPO95073 299 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 DRD4P21917 467 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 RAD23BP54727 409 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 KCNJ2P63252 427 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 PPP2R5CQ13362 524 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 AUHQ13825 339 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 WDR72Q3MJ13 1102 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 DCAF12L1Q5VU92 463 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 APBB1IPQ7Z5R6 666 aaPredicted RBP11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 CNPY4Q8N129 248 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 SYTL5Q8TDW5 730 aaPredicted RBP11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 PARD3BQ8TEW8 1205 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 MKL1Q969V6 931 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 RPS6KC1Q96S38 1066 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 KCND2Q9NZV8 630 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 FBXO40Q9UH90 709 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 LRP6O75581 1613 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 FAM47DPA6NHR8 397 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 BANF1O75531 89 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 CAP2P40123 477 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 AEBP2Q6ZN18 517 aaPredicted RBP11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 RNF149Q8NC42 400 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 FAF2Q96CS3 445 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 RBM41Q96IZ5 413 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 KREMEN1Q96MU8 473 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 ZNF408Q9H9D4 720 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 ZNF302Q9NR11 478 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 TJP1Q07157 1748 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 UBE4BO95155 1302 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 IGKV6D-41A0A0C4DH26 115 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 E2F8A0AVK6 867 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 SPDYE2BA6NHP3 402 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 H0YCG3 227 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 PPFIA2O75334 1257 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 TOM1L1O75674 476 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 CIB2O75838 187 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 VIL1P09327 827 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 SPDYE6P0CI01 402 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 SFNP31947 248 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 FMO1Q01740 532 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 SPIRE1Q08AE8 756 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 HIF1AQ16665 826 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 ERMARDQ5T6L9 678 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 RSBN1LQ6PCB5 846 aaPredicted RBP11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 EMC1Q8N766 993 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 AKT1S1Q96B36 256 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 FAM149B1Q96BN6 582 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 FAM81BQ96LP2 452 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 NUDCD1Q96RS6 583 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 ALS2Q96Q42 1657 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 CST8O60676 142 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 TTC4O95801 387 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 CIITAP33076 1130 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 NFX1Q12986 1120 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 GPAT2Q6NUI2 795 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 C15orf52Q6ZUT6 534 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 GBP7Q8N8V2 638 aaPredicted RBP11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 AGO4Q9HCK5 861 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 PARVAQ9NVD7 372 aa11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 ZC3H4Q9UPT8 1303 aaKnown RBP11.72□□□□□ -0.53
SEMA4D-201ENST00000339861 EDIL3O43854 480 aa11.71□□□□□ -0.53
SEMA4D-201ENST00000339861 ICAM1P05362 532 aa11.71□□□□□ -0.53
SEMA4D-201ENST00000339861 ESRRAP11474 423 aaPredicted RBP11.71□□□□□ -0.53
SEMA4D-201ENST00000339861 FNTAP49354 379 aa11.71□□□□□ -0.53
SEMA4D-201ENST00000339861 ARL4CP56559 192 aa11.71□□□□□ -0.53
SEMA4D-201ENST00000339861 LVRNQ6Q4G3 990 aa11.71□□□□□ -0.53
SEMA4D-201ENST00000339861 C3orf62Q6ZUJ4 267 aa11.71□□□□□ -0.53
SEMA4D-201ENST00000339861 EXOC3L1Q86VI1 746 aa11.71□□□□□ -0.53
SEMA4D-201ENST00000339861 MORC4Q8TE76 937 aa11.71□□□□□ -0.53
SEMA4D-201ENST00000339861 SPDL1Q96EA4 605 aa11.71□□□□□ -0.53
SEMA4D-201ENST00000339861 MOV10L1Q9BXT6 1211 aaKnown RBP11.71□□□□□ -0.53
SEMA4D-201ENST00000339861 LRRC4CQ9HCJ2 640 aa11.71□□□□□ -0.53
SEMA4D-201ENST00000339861 PPARGC1AQ9UBK2 798 aaKnown RBP11.71□□□□□ -0.53
SEMA4D-201ENST00000339861 AKT3Q9Y243 479 aa11.71□□□□□ -0.53
SEMA4D-201ENST00000339861 LAMB4A4D0S4 1761 aa11.71□□□□□ -0.53
SEMA4D-201ENST00000339861 CES2O00748 559 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 ANP32DO95626 131 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 GZMAP12544 262 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 KRT4P19013 534 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 VCAM1P19320 739 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 RGS7P49802 495 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 RRP1BQ14684 758 aaKnown RBP11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 ZNF568Q3ZCX4 644 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 CERKQ8TCT0 537 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 ANKRD36BP1Q96IX9 119 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 IDI2Q9BXS1 227 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 KIF9Q9HAQ2 790 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 IP6K2Q9UHH9 426 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 R3HDM2Q9Y2K5 976 aaKnown RBP11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 DGAT1O75907 488 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 CALRP27797 417 aaKnown RBP11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 GCLCP48506 637 aaPredicted RBP11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 JAM2P57087 298 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 TMPRSS15P98073 1019 aa11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 EN1Q05925 392 aaPredicted RBP11.71□□□□□ -0.54
SEMA4D-201ENST00000339861 STAT4Q14765 748 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms