RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 FAM200AQ8TCP9 573 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 HASPINQ8TF76 798 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 BCL7CQ8WUZ0 217 aaPredicted RBP15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 ARNTL2Q8WYA1 636 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 SLC35C1Q96A29 364 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 IGSF21Q96ID5 467 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 LRCH3Q96II8 777 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 PLVAPQ9BX97 442 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 MARCH5Q9NX47 278 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 SIX4Q9UIU6 781 aa15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 R3HCC1Q9Y3T6 440 aaKnown RBP15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.2■□□□□ 0.02
APOBEC3B-202ENST00000335760 ITGB1P05556 798 aa15.19■□□□□ 0.02
APOBEC3B-202ENST00000335760 RB1P06400 928 aa15.19■□□□□ 0.02
APOBEC3B-202ENST00000335760 EEF1GP26641 437 aaKnown RBP15.19■□□□□ 0.02
APOBEC3B-202ENST00000335760 PPM1AP35813 382 aa15.19■□□□□ 0.02
APOBEC3B-202ENST00000335760 KCNH2Q12809 1159 aa15.19■□□□□ 0.02
APOBEC3B-202ENST00000335760 TRPC3Q13507 836 aa15.19■□□□□ 0.02
APOBEC3B-202ENST00000335760 ZACNQ401N2 412 aa15.19■□□□□ 0.02
APOBEC3B-202ENST00000335760 HABP4Q5JVS0 413 aaKnown RBP15.19■□□□□ 0.02
APOBEC3B-202ENST00000335760 C3orf58Q8NDZ4 430 aa15.19■□□□□ 0.02
APOBEC3B-202ENST00000335760 FBXO22Q8NEZ5 403 aa15.19■□□□□ 0.02
APOBEC3B-202ENST00000335760 CXorf38Q8TB03 319 aa15.19■□□□□ 0.02
APOBEC3B-202ENST00000335760 ANP32EQ9BTT0 268 aa15.19■□□□□ 0.02
APOBEC3B-202ENST00000335760 HSD3B7Q9H2F3 369 aa15.19■□□□□ 0.02
APOBEC3B-202ENST00000335760 TMEM8AQ9HCN3 771 aa15.19■□□□□ 0.02
APOBEC3B-202ENST00000335760 C5orf67F2Z3F1 127 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 GOLGA6L19H0YKK7 550 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 TMEM189-UBE2V1I3L0A0 370 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 FGF18O76093 207 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 CST3P01034 146 aaPredicted RBP15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 CDK11BP21127 795 aaKnown RBP15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 MXI1P50539 228 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 MAN2A1Q16706 1144 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 CBWD6Q4V339 395 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 CBWD3Q5JTY5 395 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 CBWD5Q5RIA9 395 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 KRT39Q6A163 491 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 CD300LGQ6UXG3 332 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 C15orf39Q6ZRI6 1047 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 TMEM169Q96HH4 297 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 ZNF560Q96MR9 790 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 TUBGCP2Q9BSJ2 902 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 C11orf84Q9BUA3 381 aaPredicted RBP15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 ZNF576Q9H609 170 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 ADAM28Q9UKQ2 775 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 NUB1Q9Y5A7 615 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 LAMA3Q16787 3333 aa15.18■□□□□ 0.02
APOBEC3B-202ENST00000335760 TRIOBPQ9H2D6 2365 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 VNN1O95497 513 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 AFPP02771 609 aaKnown RBP15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 PRKCSHP14314 528 aaPredicted RBP15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 ZNF18P17022 549 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 PIK3CAP42336 1068 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 BRCC3P46736 316 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 FMO5P49326 533 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 TAF6P49848 677 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 MYL6P60660 151 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 TPM4P67936 248 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 PLCB3Q01970 1234 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 KRT17Q04695 432 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 GPM6BQ13491 265 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 NCOA4Q13772 614 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 SV2CQ496J9 727 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 LRRC52Q8N7C0 313 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 RNF214Q8ND24 703 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 ANKRD20A12PQ8NF67 263 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 ALG13Q9NP73 1137 aaKnown RBP15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 TAB2Q9NYJ8 693 aa15.17■□□□□ 0.02
APOBEC3B-202ENST00000335760 TMEM265A0A087WTH1 108 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 EPOPA6NHQ4 379 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 H3BNC9 293 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 I3L4J1 428 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 PES1O00541 588 aaKnown RBP15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 SPTLC1O15269 473 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 N4BP1O75113 896 aaKnown RBP15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 CLSTN1O94985 981 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 HLA-DRAP01903 254 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 TPM2P07951 284 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 ATP1A3P13637 1013 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 PNPLA4P41247 253 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 LILRA4P59901 499 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 MYL7Q01449 175 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 MYO1EQ12965 1108 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 KRT31Q15323 416 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 VWA3BQ502W6 1294 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 FUT10Q6P4F1 479 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 DSTYKQ6XUX3 929 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 DDX53Q86TM3 631 aaKnown RBP15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 TAS1R2Q8TE23 839 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 HPDLQ96IR7 371 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 GPR62Q9BZJ7 368 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 VPS16Q9H269 839 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 TTYH1Q9H313 450 aaPredicted RBP15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 LIMA1Q9UHB6 759 aaKnown RBP15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 PUF60Q9UHX1 559 aaKnown RBP15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 PLXNA4Q9HCM2 1894 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 SCN1AP35498 2009 aa15.16■□□□□ 0.02
APOBEC3B-202ENST00000335760 RFXAPO00287 272 aa15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 GRM6O15303 877 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms