RNA–Protein interactions for RNA: ENST00000335535.3

LCE4A-201, Transcript of late cornified envelope 4A, humanhuman

APPRIS P1 BASIC

Gene LCE4A, Length 388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4A-201ENST00000335535 DNAJC25Q9H1X3 360 aa13.15□□□□□ -0.3
LCE4A-201ENST00000335535 SLC39A2Q9NP94 309 aa13.15□□□□□ -0.3
LCE4A-201ENST00000335535 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.15□□□□□ -0.3
LCE4A-201ENST00000335535 ASH1LQ9NR48 2969 aaKnown RBP13.15□□□□□ -0.3
LCE4A-201ENST00000335535 WDFY3Q8IZQ1 3526 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 NBEAQ8NFP9 2946 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 A0A0U1RQF3 1178 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.14□□□□□ -0.31
LCE4A-201ENST00000335535 CNPP09543 421 aaKnown RBP13.14□□□□□ -0.31
LCE4A-201ENST00000335535 LAMP2P13473 410 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 NAMPTP43490 491 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 ZNF165P49910 485 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 SPEM2Q0P670 501 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 ALCAMQ13740 583 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 MXD4Q14582 209 aaPredicted RBP13.14□□□□□ -0.31
LCE4A-201ENST00000335535 KIZQ2M2Z5 673 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 CDCA2Q69YH5 1023 aaPredicted RBP13.14□□□□□ -0.31
LCE4A-201ENST00000335535 EFCAB12Q6NXP0 572 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 ZC3H3Q8IXZ2 948 aaKnown RBP13.14□□□□□ -0.31
LCE4A-201ENST00000335535 HELQQ8TDG4 1101 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 BCL7CQ8WUZ0 217 aaPredicted RBP13.14□□□□□ -0.31
LCE4A-201ENST00000335535 PRPF31Q8WWY3 499 aaKnown RBP13.14□□□□□ -0.31
LCE4A-201ENST00000335535 TMEM143Q96AN5 459 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 HVCN1Q96D96 273 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 RBSNQ9H1K0 784 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 HSD3B7Q9H2F3 369 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 KCTD10Q9H3F6 313 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 CBX8Q9HC52 389 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 IGF2RP11717 2491 aa13.14□□□□□ -0.31
LCE4A-201ENST00000335535 UBE4BO95155 1302 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 SPDYE4A6NLX3 237 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 FOXD2O60548 495 aaPredicted RBP13.13□□□□□ -0.31
LCE4A-201ENST00000335535 RETP07949 1114 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 TDGF1P13385 188 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 CCNE1P24864 410 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 KLRC2P26717 231 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 NMT1P30419 496 aaKnown RBP13.13□□□□□ -0.31
LCE4A-201ENST00000335535 RPS9P46781 194 aaKnown RBP13.13□□□□□ -0.31
LCE4A-201ENST00000335535 MCCD1P59942 119 aaPredicted RBP13.13□□□□□ -0.31
LCE4A-201ENST00000335535 PPP2R5AQ15172 486 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 CSRP2Q16527 193 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 NFIL3Q16649 462 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 N4BP2L1Q5TBK1 243 aaPredicted RBP13.13□□□□□ -0.31
LCE4A-201ENST00000335535 TTI2Q6NXR4 508 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 TAS1R3Q7RTX0 852 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 HAUS6Q7Z4H7 955 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 DHX40Q8IX18 779 aaKnown RBP13.13□□□□□ -0.31
LCE4A-201ENST00000335535 ZNF710Q8N1W2 664 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 KDF1Q8NAX2 398 aaPredicted RBP13.13□□□□□ -0.31
LCE4A-201ENST00000335535 PSPC1Q8WXF1 523 aaKnown RBP13.13□□□□□ -0.31
LCE4A-201ENST00000335535 ZNF707Q96C28 371 aaPredicted RBP13.13□□□□□ -0.31
LCE4A-201ENST00000335535 TMEM134Q9H6X4 195 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 MAN1C1Q9NR34 630 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 SUCLA2Q9P2R7 463 aaPredicted RBP13.13□□□□□ -0.31
LCE4A-201ENST00000335535 DPP7Q9UHL4 492 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 DACH1Q9UI36 760 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 RWDD2AQ9UIY3 292 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 TRAF3IP3Q9Y228 551 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 MTF2Q9Y483 593 aaPredicted RBP13.13□□□□□ -0.31
LCE4A-201ENST00000335535 PCDHB13Q9Y5F0 798 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 ZFP37Q9Y6Q3 630 aaPredicted RBP13.13□□□□□ -0.31
LCE4A-201ENST00000335535 NUMBLQ9Y6R0 609 aa13.13□□□□□ -0.31
LCE4A-201ENST00000335535 FLNBO75369 2602 aaKnown RBP13.13□□□□□ -0.31
LCE4A-201ENST00000335535 COL4A3Q01955 1670 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 DSPP15924 2871 aaKnown RBP13.12□□□□□ -0.31
LCE4A-201ENST00000335535 ITPR1Q14643 2758 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 CCDC195A0A1B0GUA6 201 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 H0YCG3 227 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 TGFB1I1O43294 461 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 C1RP00736 705 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 PIGRP01833 764 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 GALTP07902 379 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 MYBP10242 640 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 ZSCAN20P17040 1043 aaPredicted RBP13.12□□□□□ -0.31
LCE4A-201ENST00000335535 ABCD1P33897 745 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 LIMK1P53667 647 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 PMS1P54277 932 aaKnown RBP13.12□□□□□ -0.31
LCE4A-201ENST00000335535 PEX3P56589 373 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 PTENP60484 403 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 GPC5P78333 572 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 CDC42EP1Q00587 391 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 LAMTOR4Q0VGL1 99 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 DMP1Q13316 513 aaPredicted RBP13.12□□□□□ -0.31
LCE4A-201ENST00000335535 CAPSQ13938 189 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 MLF2Q15773 248 aaPredicted RBP13.12□□□□□ -0.31
LCE4A-201ENST00000335535 KNOP1Q1ED39 458 aaKnown RBP13.12□□□□□ -0.31
LCE4A-201ENST00000335535 MAMSTRQ6ZN01 415 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 PRR23CQ6ZRP0 262 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 MAEAQ7L5Y9 396 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 LRRC71Q8N4P6 559 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 CELF5Q8N6W0 485 aaKnown RBP13.12□□□□□ -0.31
LCE4A-201ENST00000335535 DUSP9Q99956 384 aaKnown RBP13.12□□□□□ -0.31
LCE4A-201ENST00000335535 NAT10Q9H0A0 1025 aaKnown RBP13.12□□□□□ -0.31
LCE4A-201ENST00000335535 CCDC113Q9H0I3 377 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 ADAMTS10Q9H324 1103 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 MRPL44Q9H9J2 332 aaKnown RBP13.12□□□□□ -0.31
LCE4A-201ENST00000335535 LTB4R2Q9NPC1 389 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 SEMA4GQ9NTN9 838 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 TBC1D7Q9P0N9 293 aa13.12□□□□□ -0.31
LCE4A-201ENST00000335535 ZMIZ1Q9ULJ6 1067 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms