RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 RSRC2Q7L4I2 434 aaKnown RBP12.56□□□□□ -0.4
HDAC6-201ENST00000334136 OR2W6PQ8NHA6 318 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 FAM114A2Q9NRY5 505 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 LIMA1Q9UHB6 759 aaKnown RBP12.56□□□□□ -0.4
HDAC6-201ENST00000334136 UBE4BO95155 1302 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 CLGNO14967 610 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 LYPLA2O95372 231 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 EDRF1Q3B7T1 1238 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 CCT8L2Q96SF2 557 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 SNX25Q9H3E2 840 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 OLFML3Q9NRN5 406 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 KLC4Q9NSK0 619 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 GGT7Q9UJ14 662 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 PCDHB4Q9Y5E5 795 aa12.56□□□□□ -0.4
HDAC6-201ENST00000334136 A0A0U1RQJ8 604 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 POC1B-GALNT4F8VUJ3 575 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 NPTXRO95502 500 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 MMEP08473 750 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 ACTN1P12814 892 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 CARSP49589 748 aaKnown RBP12.55□□□□□ -0.4
HDAC6-201ENST00000334136 GLB1LQ6UWU2 654 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 DEFB128Q7Z7B8 93 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 SEPT8Q92599 483 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 MED10Q9BTT4 135 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 VIPAS39Q9H9C1 493 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 HESX1Q9UBX0 185 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 PASKQ96RG2 1323 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 MAFO75444 373 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-201ENST00000334136 ACSL3O95573 720 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 TRIB2Q92519 343 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 ATP6V1G3Q96LB4 118 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 RBM12Q9NTZ6 932 aaKnown RBP12.55□□□□□ -0.4
HDAC6-201ENST00000334136 DMGDHQ9UI17 866 aaKnown RBP12.55□□□□□ -0.4
HDAC6-201ENST00000334136 TARSL2A2RTX5 802 aaKnown RBP12.55□□□□□ -0.4
HDAC6-201ENST00000334136 CCDC85CA6NKD9 419 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 TXNDC9O14530 226 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 SP2Q02086 613 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 ARHGAP1Q07960 439 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 TRIP13Q15645 432 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-201ENST00000334136 SNRNP35Q16560 246 aaKnown RBP12.55□□□□□ -0.4
HDAC6-201ENST00000334136 LMBRD2Q68DH5 695 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-201ENST00000334136 NECAB2Q7Z6G3 386 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 SPIRE2Q8WWL2 714 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 LACRTQ9GZZ8 138 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 CXorf56Q9H5V9 222 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 UBE2TQ9NPD8 197 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-201ENST00000334136 TOM1L1O75674 476 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 SNX16P57768 344 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 SNRPFP62306 86 aaKnown RBP12.55□□□□□ -0.4
HDAC6-201ENST00000334136 PTK2Q05397 1052 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 SCARA5Q6ZMJ2 495 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 AGPAT3Q9NRZ7 376 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 AMACRQ9UHK6 382 aa12.55□□□□□ -0.4
HDAC6-201ENST00000334136 TPX2Q9ULW0 747 aaKnown RBP12.55□□□□□ -0.4
HDAC6-201ENST00000334136 RASGRF2O14827 1237 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 CD58P19256 250 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 CCND3P30281 292 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-201ENST00000334136 HNRNPH1P31943 449 aaKnown RBP12.54□□□□□ -0.4
HDAC6-201ENST00000334136 ECM1Q16610 540 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 KRT39Q6A163 491 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 MTHFD1LQ6UB35 978 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 FAM81BQ96LP2 452 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 BCAS3Q9H6U6 928 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 TRPV2Q9Y5S1 764 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 ARFGEF1Q9Y6D6 1849 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 MYH6P13533 1939 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 ZNF862O60290 1169 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 PLEKP08567 350 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-201ENST00000334136 FGFR4P22455 802 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 BPIFB4P59827 614 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 ZNF211Q13398 564 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-201ENST00000334136 PPP2R5EQ16537 467 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 CCDC62Q6P9F0 684 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 EP400NLQ6ZTU2 488 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 FRMD5Q7Z6J6 570 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 ZNF410Q86VK4 478 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 ZIM3Q96PE6 472 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 EMSYQ7Z589 1322 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 FAM237AA0A1B0GTK4 181 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 OGTO15294 1046 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 DAPK3O43293 454 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 LSP1P33241 339 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 DR1Q01658 176 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 GLE1Q53GS7 698 aaKnown RBP12.54□□□□□ -0.4
HDAC6-201ENST00000334136 MAMDC4Q6UXC1 1216 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 VCXQ9H320 206 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 GOLPH3Q9H4A6 298 aa12.54□□□□□ -0.4
HDAC6-201ENST00000334136 BZW2Q9Y6E2 419 aaKnown RBP12.54□□□□□ -0.4
HDAC6-201ENST00000334136 A0A1W2PQC6 194 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 H0Y3Z8 333 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 HSPA1AP0DMV8 641 aaKnown RBP12.53□□□□□ -0.4
HDAC6-201ENST00000334136 HSPA1BP0DMV9 641 aaKnown RBP12.53□□□□□ -0.4
HDAC6-201ENST00000334136 HYIQ5T013 277 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 NME8Q8N427 588 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 ARL8AQ96BM9 186 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 PBKQ96KB5 322 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 FBXL5Q9UKA1 691 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 PPP1R3GB7ZBB8 358 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 SMIM24O75264 130 aa12.53□□□□□ -0.4
HDAC6-201ENST00000334136 SKIP12755 728 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms