RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 TRAIPQ9BWF2 469 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 OSBPL8Q9BZF1 889 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 NIF3L1Q9GZT8 377 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 ACTR5Q9H9F9 607 aaPredicted RBP13.72□□□□□ -0.21
VSTM4-202ENST00000332853 H3BRJ5 948 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 STX1BP61266 288 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 RDM1Q8NG50 284 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 LRGUKQ96M69 825 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 GOLGA8CPA6NN73 597 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 RALAP11233 206 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 TGFB2P61812 414 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 SNRPFP62306 86 aaKnown RBP13.72□□□□□ -0.21
VSTM4-202ENST00000332853 NSUN2Q08J23 767 aaKnown RBP eCLIP13.72□□□□□ -0.21
VSTM4-202ENST00000332853 DGKDQ16760 1214 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 BTBD8Q5XKL5 378 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 IFT43Q96FT9 208 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 TRIM55Q9BYV6 548 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 IL18RAPO95256 599 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 APRTP07741 180 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 DGKZQ13574 1117 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 TTC39CQ8N584 583 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 RAPGEF5Q92565 580 aa13.72□□□□□ -0.21
VSTM4-202ENST00000332853 RBM15Q96T37 977 aaKnown RBP eCLIP13.72□□□□□ -0.21
VSTM4-202ENST00000332853 CETPP11597 493 aa13.71□□□□□ -0.21
VSTM4-202ENST00000332853 COG7P83436 770 aa13.71□□□□□ -0.21
VSTM4-202ENST00000332853 PIGHQ14442 188 aaPredicted RBP13.71□□□□□ -0.21
VSTM4-202ENST00000332853 SHROOM1Q2M3G4 852 aaPredicted RBP13.71□□□□□ -0.21
VSTM4-202ENST00000332853 TAF1BQ53T94 588 aaPredicted RBP13.71□□□□□ -0.21
VSTM4-202ENST00000332853 C9orf131Q5VYM1 1079 aa13.71□□□□□ -0.21
VSTM4-202ENST00000332853 LRRC31Q6UY01 552 aa13.71□□□□□ -0.21
VSTM4-202ENST00000332853 KCTD17Q8N5Z5 321 aa13.71□□□□□ -0.21
VSTM4-202ENST00000332853 HIPK4Q8NE63 616 aa13.71□□□□□ -0.21
VSTM4-202ENST00000332853 CASKIN2Q8WXE0 1202 aa13.71□□□□□ -0.21
VSTM4-202ENST00000332853 FAM163AQ96GL9 167 aaPredicted RBP13.71□□□□□ -0.21
VSTM4-202ENST00000332853 MYO1CO00159 1063 aa13.71□□□□□ -0.21
VSTM4-202ENST00000332853 FEZF2Q8TBJ5 459 aa13.71□□□□□ -0.21
VSTM4-202ENST00000332853 TAS1R2Q8TE23 839 aa13.71□□□□□ -0.21
VSTM4-202ENST00000332853 PGBD4Q96DM1 585 aa13.71□□□□□ -0.21
VSTM4-202ENST00000332853 NT5C1AQ9BXI3 368 aa13.71□□□□□ -0.21
VSTM4-202ENST00000332853 PRKAG2Q9UGJ0 569 aa13.71□□□□□ -0.21
VSTM4-202ENST00000332853 HUNKP57058 714 aa13.71□□□□□ -0.21
VSTM4-202ENST00000332853 USP33Q8TEY7 942 aa13.71□□□□□ -0.21
VSTM4-202ENST00000332853 ZBED2Q9BTP6 218 aa13.71□□□□□ -0.21
VSTM4-202ENST00000332853 PRMT7Q9NVM4 692 aaPredicted RBP13.71□□□□□ -0.21
VSTM4-202ENST00000332853 XPO7Q9UIA9 1087 aaKnown RBP13.71□□□□□ -0.21
VSTM4-202ENST00000332853 CHN1P15882 459 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 PAMP19021 973 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 SLC12A3P55017 1021 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 BIRC2Q13490 618 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 BYSLQ13895 437 aaKnown RBP13.71□□□□□ -0.22
VSTM4-202ENST00000332853 TRIM67Q6ZTA4 783 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 RNF135Q8IUD6 432 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 ALKBH8Q96BT7 664 aaKnown RBP13.71□□□□□ -0.22
VSTM4-202ENST00000332853 HVCN1Q96D96 273 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 IDI2Q9BXS1 227 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 NEU2Q9Y3R4 380 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 A0A0U1RQJ8 604 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 ASAP2O43150 1006 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 BMP6P22004 513 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 MMGT1Q8N4V1 131 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 AGR3Q8TD06 166 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 ATG4AQ8WYN0 398 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 L2HGDHQ9H9P8 463 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 RAB6BQ9NRW1 208 aa13.71□□□□□ -0.22
VSTM4-202ENST00000332853 SLIT3O75094 1523 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 F8VZ95 297 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 VWA5AO00534 786 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 CYP11B1P15538 503 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 ITGA8P53708 1063 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 CHMP6Q96FZ7 201 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 PURBQ96QR8 312 aaKnown RBP13.7□□□□□ -0.22
VSTM4-202ENST00000332853 GAKO14976 1311 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 TCP11X1B4DZS4 312 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 RPS6KA5O75582 802 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 TFRCP02786 760 aaKnown RBP13.7□□□□□ -0.22
VSTM4-202ENST00000332853 HOXA10P31260 410 aaPredicted RBP13.7□□□□□ -0.22
VSTM4-202ENST00000332853 TPI1P60174 286 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 POU5F1BQ06416 359 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 LAMC2Q13753 1193 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 HABP4Q5JVS0 413 aaKnown RBP13.7□□□□□ -0.22
VSTM4-202ENST00000332853 CLMNQ96JQ2 1002 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 PLEKHA5Q9HAU0 1116 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 ZFP69BQ9UJL9 534 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 GUCY2CP25092 1073 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 KCNA1Q09470 495 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 KLC3Q6P597 504 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 SPATA2LQ8IUW3 424 aaPredicted RBP13.7□□□□□ -0.22
VSTM4-202ENST00000332853 RAET1EQ8TD07 263 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 RUBCNQ92622 972 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 MTMR9Q96QG7 549 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 GLIS2Q9BZE0 524 aaPredicted RBP13.7□□□□□ -0.22
VSTM4-202ENST00000332853 MTFR1LQ9H019 292 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 SP110Q9HB58 689 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 HMBSP08397 361 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 ATXN8OSP0DMR3 200 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 FAM83AQ86UY5 434 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 CCDC33Q8N5R6 958 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 ADARB2Q9NS39 739 aaKnown RBP13.7□□□□□ -0.22
VSTM4-202ENST00000332853 TISP43B9A030 160 aa13.7□□□□□ -0.22
VSTM4-202ENST00000332853 ZNF286BP0CG31 522 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms