RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 NOD2Q9HC29 1040 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 ABCF3Q9NUQ8 709 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 BTBD7Q9P203 1132 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 ARHGAP28Q9P2N2 729 aa20.29■□□□□ 0.84
LAMP1-201ENST00000332556 MGRN1O60291 552 aa20.28■□□□□ 0.84
LAMP1-201ENST00000332556 CSDE1O75534 798 aaKnown RBP20.28■□□□□ 0.84
LAMP1-201ENST00000332556 DNAJC8O75937 253 aaPredicted RBP20.28■□□□□ 0.84
LAMP1-201ENST00000332556 PAXIP1Q6ZW49 1069 aaPredicted RBP20.28■□□□□ 0.84
LAMP1-201ENST00000332556 CCDC50Q8IVM0 306 aa20.28■□□□□ 0.84
LAMP1-201ENST00000332556 AS3MTQ9HBK9 375 aa20.28■□□□□ 0.84
LAMP1-201ENST00000332556 RBAKQ9NYW8 714 aaPredicted RBP20.28■□□□□ 0.84
LAMP1-201ENST00000332556 PCDHB4Q9Y5E5 795 aa20.28■□□□□ 0.84
LAMP1-201ENST00000332556 RLFQ13129 1914 aa20.28■□□□□ 0.84
LAMP1-201ENST00000332556 PI4K2BG5E9Z4 385 aa20.28■□□□□ 0.84
LAMP1-201ENST00000332556 K7ERI5 159 aa20.28■□□□□ 0.84
LAMP1-201ENST00000332556 CST3P01034 146 aaPredicted RBP20.28■□□□□ 0.84
LAMP1-201ENST00000332556 SRGAP2CP0DJJ0 459 aa20.28■□□□□ 0.84
LAMP1-201ENST00000332556 COILP38432 576 aaPredicted RBP20.28■□□□□ 0.84
LAMP1-201ENST00000332556 NCAPG2Q86XI2 1143 aa20.28■□□□□ 0.84
LAMP1-201ENST00000332556 ANKS4BQ8N8V4 417 aa20.28■□□□□ 0.84
LAMP1-201ENST00000332556 DEPTORQ8TB45 409 aa20.28■□□□□ 0.84
LAMP1-201ENST00000332556 TRAPPC12Q8WVT3 735 aa20.28■□□□□ 0.84
LAMP1-201ENST00000332556 MLXIPLQ9NP71 852 aa20.28■□□□□ 0.84
LAMP1-201ENST00000332556 GTF3C4Q9UKN8 822 aa20.28■□□□□ 0.84
LAMP1-201ENST00000332556 MYPNQ86TC9 1320 aa20.27■□□□□ 0.84
LAMP1-201ENST00000332556 SPATA31C2B4DYI2 1134 aa20.27■□□□□ 0.84
LAMP1-201ENST00000332556 NUDT17P0C025 328 aa20.27■□□□□ 0.84
LAMP1-201ENST00000332556 GZMAP12544 262 aa20.27■□□□□ 0.84
LAMP1-201ENST00000332556 STRN3Q13033 797 aa20.27■□□□□ 0.84
LAMP1-201ENST00000332556 MIS18BP1Q6P0N0 1132 aa20.27■□□□□ 0.84
LAMP1-201ENST00000332556 SCARA5Q6ZMJ2 495 aa20.27■□□□□ 0.84
LAMP1-201ENST00000332556 CCDC63Q8NA47 563 aa20.27■□□□□ 0.84
LAMP1-201ENST00000332556 SPIRE2Q8WWL2 714 aa20.27■□□□□ 0.84
LAMP1-201ENST00000332556 MSTO1Q9BUK6 570 aa20.27■□□□□ 0.84
LAMP1-201ENST00000332556 AGAP1Q9UPQ3 857 aa20.27■□□□□ 0.84
LAMP1-201ENST00000332556 L3MBTL1Q9Y468 752 aa20.27■□□□□ 0.84
LAMP1-201ENST00000332556 AFG3L2Q9Y4W6 797 aa20.27■□□□□ 0.84
LAMP1-201ENST00000332556 NUB1Q9Y5A7 615 aa20.27■□□□□ 0.84
LAMP1-201ENST00000332556 HGSO14964 777 aaPredicted RBP20.27■□□□□ 0.83
LAMP1-201ENST00000332556 CTNNA2P26232 953 aa20.27■□□□□ 0.83
LAMP1-201ENST00000332556 ADCY1Q08828 1119 aa20.27■□□□□ 0.83
LAMP1-201ENST00000332556 TEX2Q8IWB9 1127 aa20.27■□□□□ 0.83
LAMP1-201ENST00000332556 MCOLN2Q8IZK6 566 aa20.27■□□□□ 0.83
LAMP1-201ENST00000332556 TCHPQ9BT92 498 aa20.27■□□□□ 0.83
LAMP1-201ENST00000332556 MAP3K20Q9NYL2 800 aaKnown RBP20.27■□□□□ 0.83
LAMP1-201ENST00000332556 DONSONQ9NYP3 566 aa20.27■□□□□ 0.83
LAMP1-201ENST00000332556 PCDHA3Q9Y5H8 950 aa20.27■□□□□ 0.83
LAMP1-201ENST00000332556 MIF4GDA9UHW6 222 aaKnown RBP20.26■□□□□ 0.83
LAMP1-201ENST00000332556 ACSL3O95573 720 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 RWDD2BP57060 319 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 TGFB2P61812 414 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 ORC1Q13415 861 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 R3HDM1Q15032 1099 aaKnown RBP20.26■□□□□ 0.83
LAMP1-201ENST00000332556 BRDTQ58F21 947 aaPredicted RBP20.26■□□□□ 0.83
LAMP1-201ENST00000332556 ZFYVE27Q5T4F4 411 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 MCPH1Q8NEM0 835 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 STAMBPL1Q96FJ0 436 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 PCYT2Q99447 389 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 NAP1L3Q99457 506 aaPredicted RBP20.26■□□□□ 0.83
LAMP1-201ENST00000332556 SAMD15Q9P1V8 674 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 PHIPQ8WWQ0 1821 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 ATP8B3O60423 1300 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 GHRP10912 638 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 UNGP13051 313 aaPredicted RBP20.26■□□□□ 0.83
LAMP1-201ENST00000332556 UBA1P22314 1058 aaKnown RBP20.26■□□□□ 0.83
LAMP1-201ENST00000332556 CHKAP35790 457 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 TAS2R40P59535 323 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 XKR3Q5GH77 459 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 PIGWQ7Z7B1 504 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 TAX1BP1Q86VP1 789 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 TMC2Q8TDI7 906 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 PSPC1Q8WXF1 523 aaKnown RBP20.26■□□□□ 0.83
LAMP1-201ENST00000332556 CENPTQ96BT3 561 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 PGM2Q96G03 612 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 WNT8AQ9H1J5 351 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 PARP14Q460N5 1801 aa20.26■□□□□ 0.83
LAMP1-201ENST00000332556 C4BPAP04003 597 aaKnown RBP20.25■□□□□ 0.83
LAMP1-201ENST00000332556 OATP04181 439 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 SGO2Q562F6 1265 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 WDR44Q5JSH3 913 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 KAZNQ674X7 775 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 GADL1Q6ZQY3 521 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 TIPINQ9BVW5 301 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 VPS33BQ9H267 617 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 MAPK13O15264 365 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 EXTL3O43909 919 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 CREB1P16220 341 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 CLNS1AP54105 237 aaKnown RBP20.25■□□□□ 0.83
LAMP1-201ENST00000332556 KRT17Q04695 432 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 ADCY2Q08462 1091 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 VGLL4Q14135 290 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 STXBP2Q15833 593 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 GNPTABQ3T906 1256 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 HP1BP3Q5SSJ5 553 aaPredicted RBP20.25■□□□□ 0.83
LAMP1-201ENST00000332556 WDR78Q5VTH9 848 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 EP400NLQ6ZTU2 488 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 RPS6KC1Q96S38 1066 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 ZNF112Q9UJU3 913 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 SLC12A4Q9UP95 1085 aa20.25■□□□□ 0.83
LAMP1-201ENST00000332556 CEP83Q9Y592 693 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms