RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 POLR2BP30876 1174 aaKnown RBP28.03■■■□□ 2.08
SMDT1-201ENST00000331479 BRCC3P46736 316 aa28.03■■■□□ 2.08
SMDT1-201ENST00000331479 ADGRE1Q14246 886 aa28.03■■■□□ 2.08
SMDT1-201ENST00000331479 FRMD5Q7Z6J6 570 aa28.03■■■□□ 2.08
SMDT1-201ENST00000331479 IRF2BP1Q8IU81 584 aa28.03■■■□□ 2.08
SMDT1-201ENST00000331479 ITGA11Q9UKX5 1188 aa28.03■■■□□ 2.08
SMDT1-201ENST00000331479 LZTS1Q9Y250 596 aa28.03■■■□□ 2.08
SMDT1-201ENST00000331479 I3L4J1 428 aa28.02■■■□□ 2.08
SMDT1-201ENST00000331479 IKBKBO14920 756 aa28.02■■■□□ 2.08
SMDT1-201ENST00000331479 C4BPAP04003 597 aaKnown RBP28.02■■■□□ 2.08
SMDT1-201ENST00000331479 ERVFC1P60507 584 aa28.02■■■□□ 2.08
SMDT1-201ENST00000331479 UBE3AQ05086 875 aa28.02■■■□□ 2.08
SMDT1-201ENST00000331479 ENPEPQ07075 957 aa28.02■■■□□ 2.08
SMDT1-201ENST00000331479 PPP3CAQ08209 521 aa28.02■■■□□ 2.08
SMDT1-201ENST00000331479 TPD52L1Q16890 204 aaPredicted RBP28.02■■■□□ 2.08
SMDT1-201ENST00000331479 CCDC40Q4G0X9 1142 aa28.02■■■□□ 2.08
SMDT1-201ENST00000331479 TDRD10Q5VZ19 366 aaKnown RBP28.02■■■□□ 2.08
SMDT1-201ENST00000331479 RNF168Q8IYW5 571 aaPredicted RBP28.02■■■□□ 2.08
SMDT1-201ENST00000331479 ENOX1Q8TC92 643 aaKnown RBP28.02■■■□□ 2.08
SMDT1-201ENST00000331479 GUCD1Q96NT3 240 aa28.02■■■□□ 2.08
SMDT1-201ENST00000331479 PUF60Q9UHX1 559 aaKnown RBP28.02■■■□□ 2.08
SMDT1-201ENST00000331479 AGAP1Q9UPQ3 857 aa28.02■■■□□ 2.08
SMDT1-201ENST00000331479 SCN1AP35498 2009 aa28.01■■■□□ 2.07
SMDT1-201ENST00000331479 FGFR1OPO95684 399 aaKnown RBP28.01■■■□□ 2.07
SMDT1-201ENST00000331479 CST3P01034 146 aaPredicted RBP28.01■■■□□ 2.07
SMDT1-201ENST00000331479 KRT19P08727 400 aa28.01■■■□□ 2.07
SMDT1-201ENST00000331479 USP37Q86T82 979 aa28.01■■■□□ 2.07
SMDT1-201ENST00000331479 VPS52Q8N1B4 723 aa28.01■■■□□ 2.07
SMDT1-201ENST00000331479 MTMR10Q9NXD2 777 aa28.01■■■□□ 2.07
SMDT1-201ENST00000331479 NUB1Q9Y5A7 615 aa28.01■■■□□ 2.07
SMDT1-201ENST00000331479 EYSQ5T1H1 3165 aa28.01■■■□□ 2.07
SMDT1-201ENST00000331479 SPTLC1O15269 473 aa28■■■□□ 2.07
SMDT1-201ENST00000331479 GNA14O95837 355 aa28■■■□□ 2.07
SMDT1-201ENST00000331479 IRS1P35568 1242 aa28■■■□□ 2.07
SMDT1-201ENST00000331479 GCLMP48507 274 aa28■■■□□ 2.07
SMDT1-201ENST00000331479 LILRA4P59901 499 aa28■■■□□ 2.07
SMDT1-201ENST00000331479 TIGD5Q53EQ6 642 aa28■■■□□ 2.07
SMDT1-201ENST00000331479 DCAF17Q5H9S7 520 aaPredicted RBP28■■■□□ 2.07
SMDT1-201ENST00000331479 B3GALT6Q96L58 329 aa28■■■□□ 2.07
SMDT1-201ENST00000331479 CDX2Q99626 313 aaPredicted RBP28■■■□□ 2.07
SMDT1-201ENST00000331479 MMRN2Q9H8L6 949 aa28■■■□□ 2.07
SMDT1-201ENST00000331479 METTL14Q9HCE5 456 aaKnown RBP28■■■□□ 2.07
SMDT1-201ENST00000331479 TLR9Q9NR96 1032 aa28■■■□□ 2.07
SMDT1-201ENST00000331479 NFE2L3Q9Y4A8 694 aa28■■■□□ 2.07
SMDT1-201ENST00000331479 PCDHGC5Q9Y5F6 944 aa28■■■□□ 2.07
SMDT1-201ENST00000331479 SF3B1O75533 1304 aaKnown RBP eCLIP28■■■□□ 2.07
SMDT1-201ENST00000331479 AP3M2P53677 418 aa27.99■■■□□ 2.07
SMDT1-201ENST00000331479 MARSP56192 900 aaKnown RBP27.99■■■□□ 2.07
SMDT1-201ENST00000331479 HSP90AA4PQ58FG1 418 aa27.99■■■□□ 2.07
SMDT1-201ENST00000331479 TCERG1LQ5VWI1 586 aa27.99■■■□□ 2.07
SMDT1-201ENST00000331479 C15orf39Q6ZRI6 1047 aa27.99■■■□□ 2.07
SMDT1-201ENST00000331479 SV2AQ7L0J3 742 aa27.99■■■□□ 2.07
SMDT1-201ENST00000331479 CNOT6LQ96LI5 555 aaKnown RBP27.99■■■□□ 2.07
SMDT1-201ENST00000331479 SAMSN1Q9NSI8 373 aaKnown RBP27.99■■■□□ 2.07
SMDT1-201ENST00000331479 REV3LO60673 3130 aa27.99■■■□□ 2.07
SMDT1-201ENST00000331479 ATG2AQ2TAZ0 1938 aa27.99■■■□□ 2.07
SMDT1-201ENST00000331479 SOD2P04179 222 aa27.99■■■□□ 2.07
SMDT1-201ENST00000331479 RBP5P82980 135 aa27.99■■■□□ 2.07
SMDT1-201ENST00000331479 ZACNQ401N2 412 aa27.99■■■□□ 2.07
SMDT1-201ENST00000331479 FAM171A1Q5VUB5 890 aa27.99■■■□□ 2.07
SMDT1-201ENST00000331479 MYLIPQ8WY64 445 aa27.99■■■□□ 2.07
SMDT1-201ENST00000331479 SLC35C1Q96A29 364 aa27.99■■■□□ 2.07
SMDT1-201ENST00000331479 TCF25Q9BQ70 676 aa27.99■■■□□ 2.07
SMDT1-201ENST00000331479 ZBP1Q9H171 429 aa27.99■■■□□ 2.07
SMDT1-201ENST00000331479 THAP9Q9H5L6 903 aa27.99■■■□□ 2.07
SMDT1-201ENST00000331479 VNN1O95497 513 aa27.98■■■□□ 2.07
SMDT1-201ENST00000331479 AARSP49588 968 aaKnown RBP eCLIP27.98■■■□□ 2.07
SMDT1-201ENST00000331479 BIRC3Q13489 604 aa27.98■■■□□ 2.07
SMDT1-201ENST00000331479 CREBRFQ8IUR6 639 aa27.98■■■□□ 2.07
SMDT1-201ENST00000331479 TRIM59Q8IWR1 403 aa27.98■■■□□ 2.07
SMDT1-201ENST00000331479 MRPL38Q96DV4 380 aaKnown RBP27.98■■■□□ 2.07
SMDT1-201ENST00000331479 HERC2P3Q9BVR0 1158 aa27.98■■■□□ 2.07
SMDT1-201ENST00000331479 LMAN2LQ9H0V9 348 aa27.98■■■□□ 2.07
SMDT1-201ENST00000331479 TMC7Q7Z402 723 aa27.97■■■□□ 2.07
SMDT1-201ENST00000331479 AUTS2Q8WXX7 1259 aa27.97■■■□□ 2.07
SMDT1-201ENST00000331479 NAT10Q9H0A0 1025 aaKnown RBP27.97■■■□□ 2.07
SMDT1-201ENST00000331479 CHST7Q9NS84 486 aa27.97■■■□□ 2.07
SMDT1-201ENST00000331479 VWA8A3KMH1 1905 aa27.96■■■□□ 2.07
SMDT1-201ENST00000331479 FSCN2O14926 492 aa27.96■■■□□ 2.07
SMDT1-201ENST00000331479 PHACTR2O75167 634 aa27.96■■■□□ 2.07
SMDT1-201ENST00000331479 TAF6P49848 677 aa27.96■■■□□ 2.07
SMDT1-201ENST00000331479 MYL5Q02045 173 aa27.96■■■□□ 2.07
SMDT1-201ENST00000331479 NCAPHQ15003 741 aa27.96■■■□□ 2.07
SMDT1-201ENST00000331479 CBWD6Q4V339 395 aa27.96■■■□□ 2.07
SMDT1-201ENST00000331479 CBWD3Q5JTY5 395 aa27.96■■■□□ 2.07
SMDT1-201ENST00000331479 CBWD5Q5RIA9 395 aa27.96■■■□□ 2.07
SMDT1-201ENST00000331479 PLPP4Q5VZY2 271 aa27.96■■■□□ 2.07
SMDT1-201ENST00000331479 LRRC52Q8N7C0 313 aa27.96■■■□□ 2.07
SMDT1-201ENST00000331479 SUSD3Q96L08 255 aa27.96■■■□□ 2.07
SMDT1-201ENST00000331479 TMEM8AQ9HCN3 771 aa27.96■■■□□ 2.07
SMDT1-201ENST00000331479 ENTPD7Q9NQZ7 604 aa27.96■■■□□ 2.07
SMDT1-201ENST00000331479 MTCH2Q9Y6C9 303 aa27.96■■■□□ 2.07
SMDT1-201ENST00000331479 TRAPPC3O43617 180 aa27.95■■■□□ 2.07
SMDT1-201ENST00000331479 CTSAP10619 480 aa27.95■■■□□ 2.07
SMDT1-201ENST00000331479 IGFBP4P22692 258 aa27.95■■■□□ 2.07
SMDT1-201ENST00000331479 TKTP29401 623 aaKnown RBP27.95■■■□□ 2.07
SMDT1-201ENST00000331479 GTF2H1P32780 548 aa27.95■■■□□ 2.07
SMDT1-201ENST00000331479 ELAVL2Q12926 359 aaKnown RBP27.95■■■□□ 2.07
SMDT1-201ENST00000331479 PTPROQ16827 1216 aa27.95■■■□□ 2.07
SMDT1-201ENST00000331479 USP41Q3LFD5 358 aa27.95■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms