RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 DNAI2Q9GZS0 605 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 TMEM117Q9H0C3 514 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 RSAD1Q9HA92 442 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 SNTG2Q9NY99 539 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 SIK3Q9Y2K2 1263 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 PCDHB7Q9Y5E2 793 aa10.22□□□□□ -0.77
C11orf54-201ENST00000331239 A0A0U1RQJ8 604 aa10.21□□□□□ -0.77
C11orf54-201ENST00000331239 EVI5O60447 810 aa10.21□□□□□ -0.77
C11orf54-201ENST00000331239 TMEM191BP0C7N4 346 aa10.21□□□□□ -0.77
C11orf54-201ENST00000331239 CXCL8P10145 99 aa10.21□□□□□ -0.77
C11orf54-201ENST00000331239 KRT9P35527 623 aa10.21□□□□□ -0.77
C11orf54-201ENST00000331239 FPGSQ05932 587 aa10.21□□□□□ -0.77
C11orf54-201ENST00000331239 DCAF17Q5H9S7 520 aaPredicted RBP10.21□□□□□ -0.77
C11orf54-201ENST00000331239 ZNF569Q5MCW4 686 aa10.21□□□□□ -0.77
C11orf54-201ENST00000331239 GLB1LQ6UWU2 654 aa10.21□□□□□ -0.77
C11orf54-201ENST00000331239 ZNF771Q7L3S4 317 aaPredicted RBP10.21□□□□□ -0.77
C11orf54-201ENST00000331239 CREBRFQ8IUR6 639 aa10.21□□□□□ -0.77
C11orf54-201ENST00000331239 RDH13Q8NBN7 331 aa10.21□□□□□ -0.77
C11orf54-201ENST00000331239 PLEKHO2Q8TD55 490 aa10.21□□□□□ -0.77
C11orf54-201ENST00000331239 ATRIPQ8WXE1 791 aa10.21□□□□□ -0.77
C11orf54-201ENST00000331239 PPP1R10Q96QC0 940 aaKnown RBP10.21□□□□□ -0.77
C11orf54-201ENST00000331239 PDE11AQ9HCR9 933 aa10.21□□□□□ -0.77
C11orf54-201ENST00000331239 SMIM28A0A1B0GU29 152 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 MGEA5O60502 916 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 P4HA1P13674 534 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 TBXAS1P24557 533 aaPredicted RBP10.21□□□□□ -0.78
C11orf54-201ENST00000331239 TNFSF9P41273 254 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 YWHAEP62258 255 aaKnown RBP10.21□□□□□ -0.78
C11orf54-201ENST00000331239 GCNT1Q02742 428 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 PPP3CAQ08209 521 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 TUBB2AQ13885 445 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 TERF2Q15554 542 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 WDR44Q5JSH3 913 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 TRAPPC11Q7Z392 1133 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 RPS6KC1Q96S38 1066 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 TMEM175Q9BSA9 504 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 TUBB2BQ9BVA1 445 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 IMPG2Q9BZV3 1241 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 NXF3Q9H4D5 531 aaKnown RBP10.21□□□□□ -0.78
C11orf54-201ENST00000331239 RAB20Q9NX57 234 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 CEP72Q9P209 647 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 CDC23Q9UJX2 597 aa10.21□□□□□ -0.78
C11orf54-201ENST00000331239 SCN5AQ14524 2016 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 ANO9A1A5B4 782 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 CTAGE9A4FU28 777 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 RNF225M0QZC1 329 aaPredicted RBP10.2□□□□□ -0.78
C11orf54-201ENST00000331239 ATP8B1O43520 1251 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 THP07101 528 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 CCDC172P0C7W6 258 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 HARSP12081 509 aaKnown RBP10.2□□□□□ -0.78
C11orf54-201ENST00000331239 PON1P27169 355 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 ZBTB41Q5SVQ8 909 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 COL13A1Q5TAT6 717 aaPredicted RBP10.2□□□□□ -0.78
C11orf54-201ENST00000331239 CC2D1AQ6P1N0 951 aaPredicted RBP10.2□□□□□ -0.78
C11orf54-201ENST00000331239 AGMOQ6ZNB7 445 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 CEP112Q8N8E3 955 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 NEK11Q8NG66 645 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 LMO3Q8TAP4 145 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 LINC01599Q8WXQ3 324 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 HERVK_113Q902F9 699 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 CCDC127Q96BQ5 260 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 ZNF560Q96MR9 790 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 PPP1R12CQ9BZL4 782 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 EPC1Q9H2F5 836 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 CYP3A43Q9HB55 503 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 ST7Q9NRC1 585 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 DPP3Q9NY33 737 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 MYO1AQ9UBC5 1043 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 PARP2Q9UGN5 583 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 LRFN2Q9ULH4 789 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 CAPN11Q9UMQ6 739 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 TDRD15B5MCY1 1934 aaKnown RBP10.2□□□□□ -0.78
C11orf54-201ENST00000331239 TMEM189-UBE2V1I3L0A0 370 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 SEC31AO94979 1220 aaKnown RBP10.2□□□□□ -0.78
C11orf54-201ENST00000331239 FGBP02675 491 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 DLATP10515 647 aaKnown RBP10.2□□□□□ -0.78
C11orf54-201ENST00000331239 ANXA13P27216 316 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 PLA2G4AP47712 749 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 CCL23P55773 120 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 MYO1EQ12965 1108 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 TRPC3Q13507 836 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 JADE1Q6IE81 842 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 DPH6Q7L8W6 267 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 TNS4Q8IZW8 715 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 SLC35F6Q8N357 371 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 ZSWIM2Q8NEG5 633 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 ZNF516Q92618 1163 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 KIF12Q96FN5 646 aa10.2□□□□□ -0.78
C11orf54-201ENST00000331239 UMODL1Q5DID0 1318 aa10.19□□□□□ -0.78
C11orf54-201ENST00000331239 TRIP11Q15643 1979 aa10.19□□□□□ -0.78
C11orf54-201ENST00000331239 MKI67P46013 3256 aaKnown RBP10.19□□□□□ -0.78
C11orf54-201ENST00000331239 ARL5CA6NH57 179 aa10.19□□□□□ -0.78
C11orf54-201ENST00000331239 PES1O00541 588 aaKnown RBP10.19□□□□□ -0.78
C11orf54-201ENST00000331239 PIRO00625 290 aa10.19□□□□□ -0.78
C11orf54-201ENST00000331239 ASS1P00966 412 aaKnown RBP10.19□□□□□ -0.78
C11orf54-201ENST00000331239 ARHGAP25P42331 645 aa10.19□□□□□ -0.78
C11orf54-201ENST00000331239 GCLMP48507 274 aa10.19□□□□□ -0.78
C11orf54-201ENST00000331239 FAM193AP78312 1265 aa10.19□□□□□ -0.78
C11orf54-201ENST00000331239 DLG4P78352 724 aa10.19□□□□□ -0.78
C11orf54-201ENST00000331239 KCNMA1Q12791 1236 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms