RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 KRT72Q14CN4 511 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 CYP4F22Q6NT55 531 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 MKNK1Q9BUB5 465 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 TRIM55Q9BYV6 548 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 OSBPL8Q9BZF1 889 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 FOXP3Q9BZS1 431 aa25.75■■□□□ 1.71
SOX1-201ENST00000330949 MED24O75448 989 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 VAV1P15498 845 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 PGM1P36871 562 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 CCNFP41002 786 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 MAGEA4P43358 317 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 POTEGQ6S5H5 508 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 RINLQ6ZS11 566 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 WDR66Q8TBY9 1149 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 ZNF564Q8TBZ8 553 aaPredicted RBP25.74■■□□□ 1.71
SOX1-201ENST00000330949 C8orf37Q96NL8 207 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 ETNK2Q9NVF9 386 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 NDE1Q9NXR1 346 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 SMIM31A0A1B0GVY4 71 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 MTA1Q13330 715 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 PKN2Q16513 984 aaKnown RBP25.74■■□□□ 1.71
SOX1-201ENST00000330949 CFAP157Q5JU67 520 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 LVRNQ6Q4G3 990 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 ACAD11Q709F0 780 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 PHLDB2Q86SQ0 1253 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 MYLK4Q86YV6 388 aaPredicted RBP25.74■■□□□ 1.71
SOX1-201ENST00000330949 NDUFA13Q9P0J0 144 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 KANSL3Q9P2N6 904 aa25.74■■□□□ 1.71
SOX1-201ENST00000330949 CCNL1Q9UK58 526 aaPredicted RBP25.74■■□□□ 1.71
SOX1-201ENST00000330949 HNRNPRO43390 633 aaKnown RBP25.73■■□□□ 1.71
SOX1-201ENST00000330949 ITGA2BP08514 1039 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 GCAP28676 217 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 ZBTB16Q05516 673 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 IRS2Q9Y4H2 1338 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 MAST2Q6P0Q8 1798 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 A0A0G2JND7 137 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 TYROBPO43914 113 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 SPATA31D3P0C874 917 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 VPS41P49754 854 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 AP2B1P63010 937 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 C6orf163Q5TEZ5 329 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 SPATA31D4Q6ZUB0 917 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 CCDC89Q8N998 374 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 PSPC1Q8WXF1 523 aaKnown RBP25.73■■□□□ 1.71
SOX1-201ENST00000330949 RBM15Q96T37 977 aaKnown RBP eCLIP25.73■■□□□ 1.71
SOX1-201ENST00000330949 CHORDC1Q9UHD1 332 aaPredicted RBP25.73■■□□□ 1.71
SOX1-201ENST00000330949 DNM3Q9UQ16 869 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 UFL1O94874 794 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 RARBP10826 455 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 FGFR1P11362 822 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 RRM1P23921 792 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 R3HDM1Q15032 1099 aaKnown RBP25.73■■□□□ 1.71
SOX1-201ENST00000330949 CBWD6Q4V339 395 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 CBWD3Q5JTY5 395 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 CBWD5Q5RIA9 395 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 PPP1R18Q6NYC8 613 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 KIAA0825Q8IV33 1275 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 RFWD2Q8NHY2 731 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 ATG4AQ8WYN0 398 aa25.73■■□□□ 1.71
SOX1-201ENST00000330949 ATP9BO43861 1147 aa25.72■■□□□ 1.71
SOX1-201ENST00000330949 MAGEC1O60732 1142 aa25.72■■□□□ 1.71
SOX1-201ENST00000330949 AMPD1P23109 780 aa25.72■■□□□ 1.71
SOX1-201ENST00000330949 BPIFB4P59827 614 aa25.72■■□□□ 1.71
SOX1-201ENST00000330949 LLGL1Q15334 1064 aa25.72■■□□□ 1.71
SOX1-201ENST00000330949 UBE2SQ16763 222 aa25.72■■□□□ 1.71
SOX1-201ENST00000330949 NUP85Q9BW27 656 aa25.72■■□□□ 1.71
SOX1-201ENST00000330949 LRRC4BQ9NT99 713 aa25.72■■□□□ 1.71
SOX1-201ENST00000330949 POC1B-GALNT4F8VUJ3 575 aa25.72■■□□□ 1.71
SOX1-201ENST00000330949 RPS6KA4O75676 772 aa25.72■■□□□ 1.71
SOX1-201ENST00000330949 MYL7Q01449 175 aa25.72■■□□□ 1.71
SOX1-201ENST00000330949 DEUP1Q05D60 604 aa25.72■■□□□ 1.71
SOX1-201ENST00000330949 PABPC4Q13310 644 aaKnown RBP eCLIP25.72■■□□□ 1.71
SOX1-201ENST00000330949 VTI1AQ96AJ9 217 aa25.72■■□□□ 1.71
SOX1-201ENST00000330949 MTO1Q9Y2Z2 717 aaKnown RBP25.72■■□□□ 1.71
SOX1-201ENST00000330949 MYO3BQ8WXR4 1341 aa25.71■■□□□ 1.71
SOX1-201ENST00000330949 ARFIP2P53365 341 aa25.71■■□□□ 1.71
SOX1-201ENST00000330949 CDC16Q13042 620 aa25.71■■□□□ 1.71
SOX1-201ENST00000330949 IZUMO3Q5VZ72 239 aa25.71■■□□□ 1.71
SOX1-201ENST00000330949 SKA1Q96BD8 255 aa25.71■■□□□ 1.71
SOX1-201ENST00000330949 DDX27Q96GQ7 796 aaKnown RBP25.71■■□□□ 1.71
SOX1-201ENST00000330949 FAM161BQ96MY7 647 aa25.71■■□□□ 1.71
SOX1-201ENST00000330949 DCLK3Q9C098 648 aa25.71■■□□□ 1.71
SOX1-201ENST00000330949 RHBDL2Q9NX52 303 aa25.71■■□□□ 1.71
SOX1-201ENST00000330949 TGFB1I1O43294 461 aa25.71■■□□□ 1.71
SOX1-201ENST00000330949 OPHN1O60890 802 aa25.71■■□□□ 1.71
SOX1-201ENST00000330949 RNASEH1O60930 286 aaKnown RBP25.71■■□□□ 1.71
SOX1-201ENST00000330949 TBCAO75347 108 aaKnown RBP25.71■■□□□ 1.71
SOX1-201ENST00000330949 GZMAP12544 262 aa25.71■■□□□ 1.71
SOX1-201ENST00000330949 NFIL3Q16649 462 aa25.71■■□□□ 1.71
SOX1-201ENST00000330949 MAPK6Q16659 721 aa25.71■■□□□ 1.71
SOX1-201ENST00000330949 TRMT5Q32P41 509 aaKnown RBP25.71■■□□□ 1.71
SOX1-201ENST00000330949 TMEM259Q4ZIN3 620 aa25.71■■□□□ 1.71
SOX1-201ENST00000330949 NET1Q7Z628 596 aaPredicted RBP25.71■■□□□ 1.71
SOX1-201ENST00000330949 PPCSQ9HAB8 311 aa25.71■■□□□ 1.71
SOX1-201ENST00000330949 SSU72Q9NP77 194 aaKnown RBP25.71■■□□□ 1.71
SOX1-201ENST00000330949 A6NJR5 290 aa25.7■■□□□ 1.71
SOX1-201ENST00000330949 CLK2P49760 499 aaKnown RBP25.7■■□□□ 1.71
SOX1-201ENST00000330949 CDK16Q00536 496 aa25.7■■□□□ 1.71
SOX1-201ENST00000330949 SEPT7Q16181 437 aaKnown RBP25.7■■□□□ 1.71
SOX1-201ENST00000330949 CPNE8Q86YQ8 564 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms