RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SLC29A2Q14542 456 aa15.52■□□□□ 0.07
TPM3-206ENST00000330188 LIN9Q5TKA1 542 aa15.52■□□□□ 0.07
TPM3-206ENST00000330188 DAB2IPQ5VWQ8 1189 aa15.52■□□□□ 0.07
TPM3-206ENST00000330188 METTL7BQ6UX53 244 aa15.52■□□□□ 0.07
TPM3-206ENST00000330188 GADL1Q6ZQY3 521 aa15.52■□□□□ 0.07
TPM3-206ENST00000330188 PHF13Q86YI8 300 aaPredicted RBP15.52■□□□□ 0.07
TPM3-206ENST00000330188 UBR7Q8N806 425 aa15.52■□□□□ 0.07
TPM3-206ENST00000330188 MYCBPAPQ8TBZ2 947 aa15.52■□□□□ 0.07
TPM3-206ENST00000330188 MAIP1Q8WWC4 291 aa15.52■□□□□ 0.07
TPM3-206ENST00000330188 VCPIP1Q96JH7 1222 aa15.52■□□□□ 0.07
TPM3-206ENST00000330188 CCT8L2Q96SF2 557 aa15.52■□□□□ 0.07
TPM3-206ENST00000330188 FAM129AQ9BZQ8 928 aa15.52■□□□□ 0.07
TPM3-206ENST00000330188 CCDC113Q9H0I3 377 aa15.52■□□□□ 0.07
TPM3-206ENST00000330188 ADAM22Q9P0K1 906 aa15.52■□□□□ 0.07
TPM3-206ENST00000330188 THAP12O43422 761 aa15.51■□□□□ 0.07
TPM3-206ENST00000330188 MSCO60682 206 aa15.51■□□□□ 0.07
TPM3-206ENST00000330188 ZNF132P52740 706 aa15.51■□□□□ 0.07
TPM3-206ENST00000330188 KRT17Q04695 432 aa15.51■□□□□ 0.07
TPM3-206ENST00000330188 SLMAPQ14BN4 828 aa15.51■□□□□ 0.07
TPM3-206ENST00000330188 PPP1R7Q15435 360 aa15.51■□□□□ 0.07
TPM3-206ENST00000330188 PLEKHA7Q6IQ23 1121 aa15.51■□□□□ 0.07
TPM3-206ENST00000330188 EEPD1Q7L9B9 569 aa15.51■□□□□ 0.07
TPM3-206ENST00000330188 PRPF31Q8WWY3 499 aaKnown RBP15.51■□□□□ 0.07
TPM3-206ENST00000330188 FAM107BQ9H098 131 aa15.51■□□□□ 0.07
TPM3-206ENST00000330188 RASSF4Q9H2L5 321 aa15.51■□□□□ 0.07
TPM3-206ENST00000330188 R3HDMLQ9H3Y0 253 aa15.51■□□□□ 0.07
TPM3-206ENST00000330188 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.51■□□□□ 0.07
TPM3-206ENST00000330188 CSADQ9Y600 493 aa15.51■□□□□ 0.07
TPM3-206ENST00000330188 E7EVH7 732 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 O00370 1275 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 CNMDO75829 334 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 ARIH2O95376 493 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 PAEPP09466 180 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 RARGP13631 454 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 FGFR4P22455 802 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 MAGEA9P43362 315 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 PPARDQ03181 441 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 C1QBPQ07021 282 aaKnown RBP15.5■□□□□ 0.07
TPM3-206ENST00000330188 MAMLD1Q13495 774 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 SNX1Q13596 522 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 R3HDM1Q15032 1099 aaKnown RBP15.5■□□□□ 0.07
TPM3-206ENST00000330188 CDCA2Q69YH5 1023 aaPredicted RBP15.5■□□□□ 0.07
TPM3-206ENST00000330188 B4GALNT4Q76KP1 1039 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 WDR49Q8IV35 697 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 ATG4AQ8WYN0 398 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 PAGR1Q9BTK6 254 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 MRPL4Q9BYD3 311 aaKnown RBP15.5■□□□□ 0.07
TPM3-206ENST00000330188 DCLK3Q9C098 648 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 MRPL47Q9HD33 250 aaKnown RBP15.5■□□□□ 0.07
TPM3-206ENST00000330188 PPANQ9NQ55 473 aaKnown RBP15.5■□□□□ 0.07
TPM3-206ENST00000330188 PPME1Q9Y570 386 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 TP73O15350 636 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 PSTPIP1O43586 416 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 TOM1L1O75674 476 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 FAM107AO95990 144 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 ASS1P00966 412 aaKnown RBP15.5■□□□□ 0.07
TPM3-206ENST00000330188 CST3P01034 146 aaPredicted RBP15.5■□□□□ 0.07
TPM3-206ENST00000330188 POTEJP0CG39 1038 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 EFNA5P52803 228 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 TAS2R40P59535 323 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 GRM1Q13255 1194 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 MKRN4PQ13434 485 aaPredicted RBP15.5■□□□□ 0.07
TPM3-206ENST00000330188 BYSLQ13895 437 aaKnown RBP15.5■□□□□ 0.07
TPM3-206ENST00000330188 IER5Q5VY09 327 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 MMS22LQ6ZRQ5 1243 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.5■□□□□ 0.07
TPM3-206ENST00000330188 ZBTB33Q86T24 672 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 PGM2Q96G03 612 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 FAM167AQ96KS9 214 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 WHRNQ9P202 907 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 SCINQ9Y6U3 715 aa15.5■□□□□ 0.07
TPM3-206ENST00000330188 A0A0G2JLL6 359 aaPredicted RBP15.49■□□□□ 0.07
TPM3-206ENST00000330188 ADM5C9JUS6 153 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 SOCS7O14512 581 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 RIPK2O43353 540 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 AP3M2P53677 418 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 IRX3P78415 501 aaPredicted RBP15.49■□□□□ 0.07
TPM3-206ENST00000330188 CALCOCO2Q13137 446 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 KLF1Q13351 362 aaPredicted RBP15.49■□□□□ 0.07
TPM3-206ENST00000330188 PTK6Q13882 451 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 PPP1R2P3Q6NXS1 205 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 RHBDF2Q6PJF5 856 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 PRRT2Q7Z6L0 340 aaPredicted RBP15.49■□□□□ 0.07
TPM3-206ENST00000330188 RHOT1Q8IXI2 618 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 BBXQ8WY36 941 aaPredicted RBP15.49■□□□□ 0.07
TPM3-206ENST00000330188 FGD4Q96M96 766 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 GPR20Q99678 358 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 ACO2Q99798 780 aaKnown RBP15.49■□□□□ 0.07
TPM3-206ENST00000330188 IMPG2Q9BZV3 1241 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 AZI2Q9H6S1 392 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 R3HDM2Q9Y2K5 976 aaKnown RBP15.49■□□□□ 0.07
TPM3-206ENST00000330188 ZBTB42B2RXF5 422 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 ABLIM1O14639 778 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 IRF6O14896 467 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 TRAPPC3O43617 180 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 GJB6O95452 261 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 PRKCBP05771 671 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 MARK3P27448 753 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 MAN1A1P33908 653 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 LAMTOR4Q0VGL1 99 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms