RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 DQX1Q8TE96 717 aaKnown RBP8.88□□□□□ -0.99
SKA2-201ENST00000330137 FAM172AQ8WUF8 416 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 TRABDQ9H4I3 376 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 ZBTB3Q9H5J0 574 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 NRDE2Q9H7Z3 1164 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 MATN2O00339 956 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 CASQ2O14958 399 aaPredicted RBP8.87□□□□□ -0.99
SKA2-201ENST00000330137 VILLO15195 856 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 SPAG7O75391 227 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 ALDH2P05091 517 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 HARSP12081 509 aaKnown RBP8.87□□□□□ -0.99
SKA2-201ENST00000330137 CYP7A1P22680 504 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 GEMIN4P57678 1058 aaKnown RBP8.87□□□□□ -0.99
SKA2-201ENST00000330137 PLOD1Q02809 727 aaPredicted RBP8.87□□□□□ -0.99
SKA2-201ENST00000330137 GSTM4Q03013 218 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 CTTNQ14247 550 aaKnown RBP8.87□□□□□ -0.99
SKA2-201ENST00000330137 NKX1-1Q15270 411 aaPredicted RBP8.87□□□□□ -0.99
SKA2-201ENST00000330137 CALCRLQ16602 461 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 CERKLQ49MI3 558 aaPredicted RBP8.87□□□□□ -0.99
SKA2-201ENST00000330137 UBAP2Q5T6F2 1119 aaKnown RBP8.87□□□□□ -0.99
SKA2-201ENST00000330137 FAM196AQ6ZSG2 479 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 CHSY1Q86X52 802 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 PLEKHO2Q8TD55 490 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 CEP95Q96GE4 821 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 HNRNPABQ99729 332 aaKnown RBP8.87□□□□□ -0.99
SKA2-201ENST00000330137 KLHL4Q9C0H6 718 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 RBM38Q9H0Z9 239 aaKnown RBP8.87□□□□□ -0.99
SKA2-201ENST00000330137 MKNK2Q9HBH9 465 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 MLXIPLQ9NP71 852 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 ARL8BQ9NVJ2 186 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 LRP2BPQ9P2M1 347 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 ARPP21Q9UBL0 812 aaPredicted RBP8.87□□□□□ -0.99
SKA2-201ENST00000330137 ZNF536O15090 1300 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 NFASCO94856 1347 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 SH3PXD2BA1X283 911 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 TMEM247A6NEH6 219 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 A6NJR5 290 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 EIF2S1P05198 315 aaKnown RBP8.87□□□□□ -0.99
SKA2-201ENST00000330137 TNFAIP3P21580 790 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 NR2F2P24468 414 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 ARFIP2P53365 341 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 GPC5P78333 572 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 KRT17Q04695 432 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 LETM2Q2VYF4 491 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 UGT2A3Q6UWM9 527 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 KIF6Q6ZMV9 814 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 RNF207Q6ZRF8 634 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 RASSF3Q86WH2 238 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 SLF2Q8IX21 1173 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 CCDC89Q8N998 374 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 DDX50Q9BQ39 737 aaKnown RBP8.87□□□□□ -0.99
SKA2-201ENST00000330137 MKNK1Q9BUB5 465 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 EIF2AQ9BY44 585 aaKnown RBP8.87□□□□□ -0.99
SKA2-201ENST00000330137 GREM2Q9H772 168 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 ANAPC5Q9UJX4 755 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 TMEM98Q9Y2Y6 226 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 MEGF6O75095 1541 aa8.87□□□□□ -0.99
SKA2-201ENST00000330137 ANKRD63C9JTQ0 380 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 KLF11O14901 512 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 SPATA31D3P0C874 917 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 GZMAP12544 262 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 ACTN1P12814 892 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 ATF2P15336 505 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 VCLP18206 1134 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 IGHMBP2P38935 993 aaKnown RBP8.86□□□□□ -0.99
SKA2-201ENST00000330137 TBL3Q12788 808 aaKnown RBP8.86□□□□□ -0.99
SKA2-201ENST00000330137 ZNF211Q13398 564 aaPredicted RBP8.86□□□□□ -0.99
SKA2-201ENST00000330137 BCL2A1Q16548 175 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 SPATA31D4Q6ZUB0 917 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 DHDDSQ86SQ9 333 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 AHI1Q8N157 1196 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 RASGRP4Q8TDF6 673 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 DYDC2Q96IM9 177 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 ZNF696Q9H7X3 374 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 DNAJC18Q9H819 358 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 USP29Q9HBJ7 922 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 METTL5Q9NRN9 209 aaKnown RBP8.86□□□□□ -0.99
SKA2-201ENST00000330137 HEY2Q9UBP5 337 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 MAD2L2Q9UI95 211 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 ASAP1Q9ULH1 1129 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 FADS3Q9Y5Q0 445 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 CACNA1SQ13698 1873 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.86□□□□□ -0.99
SKA2-201ENST00000330137 VARSP26640 1264 aaKnown RBP8.86□□□□□ -0.99
SKA2-201ENST00000330137 MTTPP55157 894 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 LRRC41Q15345 812 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 CLPPQ16740 277 aaPredicted RBP8.86□□□□□ -0.99
SKA2-201ENST00000330137 KNOP1Q1ED39 458 aaKnown RBP8.86□□□□□ -0.99
SKA2-201ENST00000330137 P3H1Q32P28 736 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 RINLQ6ZS11 566 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 DEFB132Q7Z7B7 95 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 ERI1Q8IV48 349 aaKnown RBP8.86□□□□□ -0.99
SKA2-201ENST00000330137 ZDHHC14Q8IZN3 488 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 ZCCHC9Q8N567 271 aaKnown RBP8.86□□□□□ -0.99
SKA2-201ENST00000330137 DTX3LQ8TDB6 740 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 SNX29Q8TEQ0 813 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 GPKOWQ92917 476 aaPredicted RBP eCLIP8.86□□□□□ -0.99
SKA2-201ENST00000330137 SLCO1B3Q9NPD5 702 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 GCNT4Q9P109 453 aa8.86□□□□□ -0.99
SKA2-201ENST00000330137 PLA2G4CQ9UP65 541 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms