RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 HLA-DOAP06340 250 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 OSMP13725 252 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 MCAMP43121 646 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 GPR3P46089 330 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 MTNR1BP49286 362 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 RNASE9P60153 205 aaKnown RBP2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 ERVK-21P61565 698 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 KLF1Q13351 362 aaPredicted RBP2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 NOMO1Q15155 1222 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 ATXN7L2Q5T6C5 722 aaPredicted RBP2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 ZNF627Q7L945 461 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 DRC7Q8IY82 874 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 MYEOVQ96EZ4 313 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 MENTQ9BUN1 341 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 REXO4Q9GZR2 422 aaKnown RBP2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 DMRT3Q9NQL9 472 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 TMEM140Q9NV12 185 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 CHST2Q9Y4C5 530 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 COL15A1P39059 1388 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 PDE4DIPQ5VU43 2346 aa2.18□□□□□ -2.06
CCDC144A-201ENST00000328495 CXorf49A8MYA2 514 aaPredicted RBP2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 LEFTY2O00292 366 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 FOXN1O15353 648 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 RAP2AP10114 183 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 ALOX15P16050 662 aaPredicted RBP2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 ZSCAN20P17040 1043 aaPredicted RBP2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 NR4A1P22736 598 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 MGAT2Q10469 447 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 CRB2Q5IJ48 1285 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 DDX42Q86XP3 938 aaKnown RBP eCLIP2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 REPS2Q8NFH8 660 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 HNRNPABQ99729 332 aaKnown RBP2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 TTPALQ9BTX7 342 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 IKZF4Q9H2S9 585 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 ZNF768Q9H5H4 540 aaKnown RBP2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 AKIP1Q9NQ31 210 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 SLC5A4Q9NY91 659 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 DIP2CQ9Y2E4 1556 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 ITSN2Q9NZM3 1697 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 IGSF3O75054 1194 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 GSPT1P15170 499 aaKnown RBP2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 ATP5JP18859 108 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 AGXTP21549 392 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 SREBF1P36956 1147 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 INHBEP58166 350 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 RAP2BP61225 183 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 CLUL1Q15846 466 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 LAIR1Q6GTX8 287 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 Q6ZVL8 140 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 CNTD1Q8N815 330 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 CASKIN2Q8WXE0 1202 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 HOXB13Q92826 284 aaPredicted RBP2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 CYFIP2Q96F07 1278 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 MLST8Q9BVC4 326 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 MANSC1Q9H8J5 431 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 ATP8A1Q9Y2Q0 1164 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 HS3ST4Q9Y661 456 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 USP6P35125 1406 aa2.17□□□□□ -2.06
CCDC144A-201ENST00000328495 TRIM75PA6NK02 468 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 NCR1O76036 304 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 RHOBTB3O94955 611 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 POU3F3P20264 500 aaPredicted RBP2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 PPP3CAQ08209 521 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 AFMIDQ63HM1 303 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 ARMC6Q6NXE6 501 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 SYT12Q8IV01 421 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 RPUSD2Q8IZ73 545 aaKnown RBP2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 FBXO18Q8NFZ0 1043 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 SLC35B2Q8TB61 432 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 FAM126AQ9BYI3 521 aaPredicted RBP2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 ZNF277Q9NRM2 450 aaPredicted RBP2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 SAP30BPQ9UHR5 308 aaKnown RBP2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 DNM3Q9UQ16 869 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 ATP11BQ9Y2G3 1177 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 PCDHGA2Q9Y5H1 932 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 DNMT1P26358 1616 aaKnown RBP2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 PPIP5K1Q6PFW1 1433 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 LRRIQ1Q96JM4 1722 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 B3GALT2O43825 422 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 GPR32O75388 356 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 GUCY1A2P33402 732 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 BMPR1AP36894 532 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 CHN2P52757 468 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 FAM189BP81408 668 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 CSRP2Q16527 193 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 ATP2B3Q16720 1220 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 BEAN1Q3B7T3 259 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 PDCD4Q53EL6 469 aaKnown RBP2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 PHACTR3Q96KR7 559 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 MRI1Q9BV20 369 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 CYP4F11Q9HBI6 524 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 MKS1Q9NXB0 559 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 AJAP1Q9UKB5 411 aaPredicted RBP2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 USP15Q9Y4E8 981 aaPredicted RBP2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 FPGT-TNNI3KV9GXZ4 949 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 ATRNL1Q5VV63 1379 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 CENPVL1A0A0U1RR11 272 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 TMEM200CA6NKL6 621 aa2.16□□□□□ -2.06
CCDC144A-201ENST00000328495 NDUFA10O95299 355 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms