RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 KITP10721 976 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 ATP5JP18859 108 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 HMGA2P52926 109 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 RAB1AP62820 205 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 ATP8B2P98198 1209 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 ABHD18Q0P651 414 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 FHL2Q14192 279 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 RAB39AQ14964 217 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 SAFBQ15424 915 aaKnown RBP eCLIP4.93□□□□□ -1.62
SKP1-201ENST00000328392 CSRP2Q16527 193 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 ANO6Q4KMQ2 910 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 CCSAPQ6IQ19 270 aaPredicted RBP4.93□□□□□ -1.62
SKP1-201ENST00000328392 ZNF572Q7Z3I7 529 aaPredicted RBP4.93□□□□□ -1.62
SKP1-201ENST00000328392 APBB1IPQ7Z5R6 666 aaPredicted RBP4.93□□□□□ -1.62
SKP1-201ENST00000328392 MPHOSPH6Q99547 160 aaKnown RBP4.93□□□□□ -1.62
SKP1-201ENST00000328392 C11orf54Q9H0W9 315 aaPredicted RBP4.93□□□□□ -1.62
SKP1-201ENST00000328392 BHMT2Q9H2M3 363 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 ZMAT3Q9HA38 289 aaKnown RBP4.93□□□□□ -1.62
SKP1-201ENST00000328392 PNPOQ9NVS9 261 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 MOCS1Q9NZB8 636 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 GPRC5BQ9NZH0 403 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 SLC23A1Q9UHI7 598 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 USP25Q9UHP3 1055 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 FEZ2Q9UHY8 353 aaPredicted RBP4.93□□□□□ -1.62
SKP1-201ENST00000328392 POLHQ9Y253 713 aa4.93□□□□□ -1.62
SKP1-201ENST00000328392 REXO2Q9Y3B8 237 aaKnown RBP4.93□□□□□ -1.62
SKP1-201ENST00000328392 F2RL2O00254 374 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 TRIM27P14373 513 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 TYRP14679 529 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 PEX2P28328 305 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 CTXN1P60606 82 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 SP140Q13342 867 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 FGL2Q14314 439 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 RABL3Q5HYI8 236 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 FAM47AQ5JRC9 791 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 KHDC1LQ5JSQ8 128 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 GJC2Q5T442 439 aaPredicted RBP4.92□□□□□ -1.62
SKP1-201ENST00000328392 RNF220Q5VTB9 566 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 DARS2Q6PI48 645 aaKnown RBP4.92□□□□□ -1.62
SKP1-201ENST00000328392 CHST15Q7LFX5 561 aaPredicted RBP4.92□□□□□ -1.62
SKP1-201ENST00000328392 PPP1R3BQ86XI6 285 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 PJA1Q8NG27 643 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 ZNF483Q8TF39 744 aaPredicted RBP4.92□□□□□ -1.62
SKP1-201ENST00000328392 NEU4Q8WWR8 484 aaPredicted RBP4.92□□□□□ -1.62
SKP1-201ENST00000328392 LARP4BQ92615 738 aaKnown RBP4.92□□□□□ -1.62
SKP1-201ENST00000328392 TTC17Q96AE7 1141 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 MTFMTQ96DP5 389 aaKnown RBP4.92□□□□□ -1.62
SKP1-201ENST00000328392 KCNH6Q9H252 994 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 TMEM60Q9H2L4 133 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 POGKQ9P215 609 aa4.92□□□□□ -1.62
SKP1-201ENST00000328392 ATRNL1Q5VV63 1379 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 A0A1W2PPL8 197 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 GOLGA6L6A8MZA4 724 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 SLC16A6O15403 523 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 ZBED1O96006 694 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 NR4A1P22736 598 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 MCM7P33993 719 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 FLT3LGP49771 235 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 NOMO3P69849 1222 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 PURAQ00577 322 aaKnown RBP4.91□□□□□ -1.62
SKP1-201ENST00000328392 PICALMQ13492 652 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 NAIF1Q69YI7 327 aaPredicted RBP4.91□□□□□ -1.62
SKP1-201ENST00000328392 ZNF627Q7L945 461 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 SRGAP1Q7Z6B7 1085 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 SKAP1Q86WV1 359 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 KIAA0319LQ8IZA0 1049 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 OR52N2Q8NGI0 321 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 TFAP2CQ92754 450 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 GSTO2Q9H4Y5 243 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 SLC45A2Q9UMX9 530 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 L1RE1Q9UN81 338 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 SORCS3Q9UPU3 1222 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 PNPLA7Q6ZV29 1317 aa4.91□□□□□ -1.62
SKP1-201ENST00000328392 PRR5-ARHGAP8B1AHC4 643 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 ITGB1P05556 798 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 IFIT2P09913 472 aaKnown RBP4.9□□□□□ -1.63
SKP1-201ENST00000328392 HDCP19113 662 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 SLC6A2P23975 617 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 SLC7A1P30825 629 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 SLC6A4P31645 630 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 KCNJ5P48544 419 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 AGFG1P52594 562 aaKnown RBP4.9□□□□□ -1.63
SKP1-201ENST00000328392 CLRN1P58418 232 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 RHBDL3P58872 404 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 PSMC1P62191 440 aaKnown RBP4.9□□□□□ -1.63
SKP1-201ENST00000328392 NKX6-1P78426 367 aaPredicted RBP4.9□□□□□ -1.63
SKP1-201ENST00000328392 EXOSC9Q06265 439 aaKnown RBP4.9□□□□□ -1.63
SKP1-201ENST00000328392 UBE4AQ14139 1066 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 HLTFQ14527 1009 aaKnown RBP eCLIP4.9□□□□□ -1.63
SKP1-201ENST00000328392 BRD3Q15059 726 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 ATP2B3Q16720 1220 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 DCAF17Q5H9S7 520 aaPredicted RBP4.9□□□□□ -1.63
SKP1-201ENST00000328392 CYB5RLQ6IPT4 315 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 APOA5Q6Q788 366 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 MAEAQ7L5Y9 396 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 FAM83AQ86UY5 434 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 PLXDC1Q8IUK5 500 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 CASKIN2Q8WXE0 1202 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 LRTOMTQ8WZ04 291 aa4.9□□□□□ -1.63
SKP1-201ENST00000328392 TBCBQ99426 244 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms