RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 KIAA1841Q6NSI8 718 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 OTUB1Q96FW1 271 aaPredicted RBP17.24■□□□□ 0.35
SMAD3-201ENST00000327367 TRIM45Q9H8W5 580 aaPredicted RBP17.24■□□□□ 0.35
SMAD3-201ENST00000327367 ARHGEF3Q9NR81 526 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 DENND3A2RUS2 1198 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 CIAO1O76071 339 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 CENPAP49450 140 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 PKN3Q6P5Z2 889 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 NLRP10Q86W26 655 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 CAPSLQ8WWF8 208 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 PLEKHA8Q96JA3 519 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 FUT8Q9BYC5 575 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 RTN2O75298 545 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 FOSL2P15408 326 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 ITIH2P19823 946 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 TTC39BQ5VTQ0 682 aaPredicted RBP17.24■□□□□ 0.35
SMAD3-201ENST00000327367 TRMT2AQ8IZ69 625 aaKnown RBP17.24■□□□□ 0.35
SMAD3-201ENST00000327367 RMDN1Q96DB5 314 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 TMEM165Q9HC07 324 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 LCMT1Q9UIC8 334 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 TAF4O00268 1085 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 UBOX5O94941 541 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 DPP9Q86TI2 863 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 PCYOX1LQ8NBM8 494 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 UBASH3BQ8TF42 649 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 ACSF2Q96CM8 615 aaPredicted RBP17.24■□□□□ 0.35
SMAD3-201ENST00000327367 KLHL31Q9H511 634 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 MYOM2P54296 1465 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 PPP3CCP48454 512 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 PSMC5P62195 406 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 NLRP9Q7RTR0 991 aa17.24■□□□□ 0.35
SMAD3-201ENST00000327367 A0A1B0GTH6 734 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 SOX6P35712 828 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 COG2Q14746 738 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 SLFN12LQ6IEE8 588 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 MTDHQ86UE4 582 aaKnown RBP17.23■□□□□ 0.35
SMAD3-201ENST00000327367 GUCA1CO95843 209 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 LRFN2Q9ULH4 789 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 A0A1W2PQC6 194 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 ARHGEF37A1IGU5 675 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 RAD17O75943 681 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 ADARP55265 1226 aaKnown RBP17.23■□□□□ 0.35
SMAD3-201ENST00000327367 ALCAMQ13740 583 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 GTF2H3Q13889 308 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 SURF1Q15526 300 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 ISCUQ9H1K1 167 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 MEI4A8MW99 385 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 PSMC6P62333 389 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 SNX30Q5VWJ9 437 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 AFG1LQ8WV93 481 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 SGF29Q96ES7 293 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 CEP95Q96GE4 821 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 SPRTNQ9H040 489 aaPredicted RBP17.23■□□□□ 0.35
SMAD3-201ENST00000327367 FAM217BQ9NTX9 383 aaPredicted RBP17.23■□□□□ 0.35
SMAD3-201ENST00000327367 MRGBPQ9NV56 204 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 DUOX2Q9NRD8 1548 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 CDK8P49336 464 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 TRIM71Q2Q1W2 868 aaKnown RBP17.23■□□□□ 0.35
SMAD3-201ENST00000327367 ARMCX4Q5H9R4 360 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 CLEC4GQ6UXB4 293 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 ROGDIQ9GZN7 287 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 PRDM5Q9NQX1 630 aaPredicted RBP17.23■□□□□ 0.35
SMAD3-201ENST00000327367 SERPINB13Q9UIV8 391 aa17.23■□□□□ 0.35
SMAD3-201ENST00000327367 LIFRP42702 1097 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 KCTD2Q14681 263 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 KRT16P08779 473 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 TMEM79Q9BSE2 394 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 MOV10L1Q9BXT6 1211 aaKnown RBP17.22■□□□□ 0.35
SMAD3-201ENST00000327367 C6orf62Q9GZU0 229 aaPredicted RBP17.22■□□□□ 0.35
SMAD3-201ENST00000327367 PDZK1P1A8MUH7 402 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 GUCY1A2P33402 732 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 BFSP2Q13515 415 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 ITIH4Q14624 930 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 SLC18A3Q16572 532 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 ZNF568Q3ZCX4 644 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 USP13Q92995 863 aaPredicted RBP17.22■□□□□ 0.35
SMAD3-201ENST00000327367 TMEM237Q96Q45 408 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 POLIQ9UNA4 740 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 DDHD2O94830 711 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 EFHC2Q5JST6 749 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 ITPRIPL1Q6GPH6 555 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 ORAI2Q96SN7 254 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 ZMYND8Q9ULU4 1186 aaPredicted RBP17.22■□□□□ 0.35
SMAD3-201ENST00000327367 IQCA1LA6NCM1 817 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 SOAT1P35610 550 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 HSPA13P48723 471 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 PRELPP51888 382 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 KCNK10P57789 538 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 NR1I3Q14994 352 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 PCSK7Q16549 785 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 PFKFB3Q16875 520 aaPredicted RBP17.22■□□□□ 0.35
SMAD3-201ENST00000327367 SMTNL2Q2TAL5 461 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 MCEEQ96PE7 176 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 SPON2Q9BUD6 331 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 TRIM39Q9HCM9 518 aa17.22■□□□□ 0.35
SMAD3-201ENST00000327367 R3HDM1Q15032 1099 aaKnown RBP17.21■□□□□ 0.35
SMAD3-201ENST00000327367 USP38Q8NB14 1042 aa17.21■□□□□ 0.35
SMAD3-201ENST00000327367 NARS2Q96I59 477 aaKnown RBP17.21■□□□□ 0.35
SMAD3-201ENST00000327367 CACNA2D2Q9NY47 1150 aa17.21■□□□□ 0.35
SMAD3-201ENST00000327367 SLC5A4Q9NY91 659 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms