RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 XXYLT1Q8NBI6 393 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 SCFD1Q8WVM8 642 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 FAM161BQ96MY7 647 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 EPN3Q9H201 632 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 CTNNAL1Q9UBT7 734 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 SMNDC1O75940 238 aaKnown RBP eCLIP10.18□□□□□ -0.78
COL12A1-201ENST00000322507 MYCP01106 439 aaPredicted RBP10.18□□□□□ -0.78
COL12A1-201ENST00000322507 TMPRSS15P98073 1019 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 RNF219Q5W0B1 726 aaPredicted RBP10.18□□□□□ -0.78
COL12A1-201ENST00000322507 ABHD10Q9NUJ1 306 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 TNPO2O14787 897 aaKnown RBP10.18□□□□□ -0.78
COL12A1-201ENST00000322507 ABL2P42684 1182 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 CLCN6P51797 869 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 CORO7P57737 925 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 STOX2Q9P2F5 926 aaPredicted RBP10.18□□□□□ -0.78
COL12A1-201ENST00000322507 RASA4BC9J798 803 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 TEX28O15482 410 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 RASA4O43374 803 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 PGDP52209 483 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 KRT35Q92764 455 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 TAGAPQ8N103 731 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 BEST2Q8NFU1 509 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 USP13Q92995 863 aaPredicted RBP10.18□□□□□ -0.78
COL12A1-201ENST00000322507 MOV10Q9HCE1 1003 aaKnown RBP10.18□□□□□ -0.78
COL12A1-201ENST00000322507 A1BGP04217 495 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 NCF2P19878 526 aaPredicted RBP10.18□□□□□ -0.78
COL12A1-201ENST00000322507 IFNAR2P48551 515 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 ROR2Q01974 943 aaKnown RBP10.18□□□□□ -0.78
COL12A1-201ENST00000322507 YWHAHQ04917 246 aaPredicted RBP10.18□□□□□ -0.78
COL12A1-201ENST00000322507 P3H1Q32P28 736 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 FAM180AQ6UWF9 173 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 ARHGAP27Q6ZUM4 889 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 ZNF554Q86TJ5 538 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 TBC1D19Q8N5T2 526 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 MSTO1Q9BUK6 570 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 STK39Q9UEW8 545 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 USP21Q9UK80 565 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 ASAP1Q9ULH1 1129 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 LOC102724428A0A0B4J2F2 783 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 CCDC166P0CW27 439 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 GTF2H1P32780 548 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 SIK1P57059 783 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 COX10Q12887 443 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 HIC1Q14526 733 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 STILQ15468 1287 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 ERICH5Q6P6B1 374 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 LAYNQ6UX15 382 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 APPL2Q8NEU8 664 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 TIMMDC1Q9NPL8 285 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 FARP1Q9Y4F1 1045 aaPredicted RBP10.18□□□□□ -0.78
COL12A1-201ENST00000322507 ERVK-7P63135 1459 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 MYO9BQ13459 2157 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 BCAMP50895 628 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 SLC6A15Q9H2J7 730 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 PSD3Q9NYI0 1048 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 NINQ8N4C6 2090 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 DYNC1LI2O43237 492 aaPredicted RBP10.18□□□□□ -0.78
COL12A1-201ENST00000322507 CTIFO43310 598 aaKnown RBP10.18□□□□□ -0.78
COL12A1-201ENST00000322507 CSE1LP55060 971 aaKnown RBP10.18□□□□□ -0.78
COL12A1-201ENST00000322507 STK4Q13043 487 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 KIF19Q2TAC6 998 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 CDKL3Q8IVW4 592 aaPredicted RBP10.18□□□□□ -0.78
COL12A1-201ENST00000322507 AIF1LQ9BQI0 150 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 SMYD3Q9H7B4 428 aa10.18□□□□□ -0.78
COL12A1-201ENST00000322507 ABCA9Q8IUA7 1624 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 STAT5AP42229 794 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 STAT5BP51692 787 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 TTC17Q96AE7 1141 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 PEX1O43933 1283 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 MED26O95402 600 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 NNMTP40261 264 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 RGS21Q2M5E4 152 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 SFR1Q86XK3 245 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 RIBC1Q8N443 379 aaPredicted RBP10.17□□□□□ -0.78
COL12A1-201ENST00000322507 SHCBP1Q8NEM2 672 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 LGR6Q9HBX8 967 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 ANKRD6Q9Y2G4 727 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 GAS2O43903 313 aaKnown RBP10.17□□□□□ -0.78
COL12A1-201ENST00000322507 ZC3H11AO75152 810 aaKnown RBP eCLIP10.17□□□□□ -0.78
COL12A1-201ENST00000322507 COG2Q14746 738 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 SPAG16Q8N0X2 631 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 BTBD6Q96KE9 485 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 MAGEB16A2A368 324 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 CHP2O43745 196 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 SETD3Q86TU7 594 aaPredicted RBP10.17□□□□□ -0.78
COL12A1-201ENST00000322507 COA1Q9GZY4 146 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 PLEKHA4Q9H4M7 779 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 FEM1BQ9UK73 627 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 IFNA16P05015 189 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 COLGALT2Q8IYK4 626 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 C17orf53Q8N3J3 647 aaPredicted RBP10.17□□□□□ -0.78
COL12A1-201ENST00000322507 SNX19Q92543 992 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 GORASP1Q9BQQ3 440 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 PARD6BQ9BYG5 372 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 SFMBT1Q9UHJ3 866 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 TARBP1Q13395 1621 aaKnown RBP10.17□□□□□ -0.78
COL12A1-201ENST00000322507 SPANXN2Q5MJ10 180 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 PAGR1Q9BTK6 254 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 DAPK2Q9UIK4 370 aa10.17□□□□□ -0.78
COL12A1-201ENST00000322507 METTL21EPA6NDL7 271 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms