RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 SP7Q8TDD2 431 aaPredicted RBP22.78■■□□□ 1.24
YBX1-201ENST00000321358 TAS1R2Q8TE23 839 aa22.78■■□□□ 1.24
YBX1-201ENST00000321358 ZNF558Q96NG5 402 aa22.78■■□□□ 1.24
YBX1-201ENST00000321358 PRO3102Q9H379 93 aa22.78■■□□□ 1.24
YBX1-201ENST00000321358 DNAJB4Q9UDY4 337 aa22.78■■□□□ 1.24
YBX1-201ENST00000321358 PRG3Q9Y2Y8 225 aaPredicted RBP22.78■■□□□ 1.24
YBX1-201ENST00000321358 RWDD3Q9Y3V2 267 aa22.78■■□□□ 1.24
YBX1-201ENST00000321358 PCDHB12Q9Y5F1 795 aa22.78■■□□□ 1.24
YBX1-201ENST00000321358 ANO9A1A5B4 782 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 CST3P01034 146 aaPredicted RBP22.77■■□□□ 1.24
YBX1-201ENST00000321358 EXOC3L4Q17RC7 722 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 FAM109BQ6ICB4 259 aaPredicted RBP22.77■■□□□ 1.24
YBX1-201ENST00000321358 TAF4BQ92750 862 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 HPDLQ96IR7 371 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 CWH43Q9H720 699 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 IFNKQ9P0W0 207 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 SIX4Q9UIU6 781 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 COQ4Q9Y3A0 265 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 A0A1W2PPC1 479 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 PIRO00625 290 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 NRP1O14786 923 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 TADA2AO75478 443 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 GALTP07902 379 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 SLC11A1P49279 550 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 ZNF699Q32M78 642 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 SV2CQ496J9 727 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 KCNT2Q6UVM3 1135 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 APTXQ7Z2E3 356 aaKnown RBP22.77■■□□□ 1.24
YBX1-201ENST00000321358 PCMTD1Q96MG8 357 aaPredicted RBP22.77■■□□□ 1.24
YBX1-201ENST00000321358 RTN4Q9NQC3 1192 aaKnown RBP22.77■■□□□ 1.24
YBX1-201ENST00000321358 GCNT4Q9P109 453 aa22.77■■□□□ 1.24
YBX1-201ENST00000321358 CITO14578 2027 aa22.76■■□□□ 1.23
YBX1-201ENST00000321358 A0A1B0GTH6 734 aa22.76■■□□□ 1.23
YBX1-201ENST00000321358 TRAPPC3O43617 180 aa22.76■■□□□ 1.23
YBX1-201ENST00000321358 P4HA1P13674 534 aa22.76■■□□□ 1.23
YBX1-201ENST00000321358 PPM1AP35813 382 aa22.76■■□□□ 1.23
YBX1-201ENST00000321358 TAF6P49848 677 aa22.76■■□□□ 1.23
YBX1-201ENST00000321358 MYL6P60660 151 aa22.76■■□□□ 1.23
YBX1-201ENST00000321358 RABGGTAQ92696 567 aa22.76■■□□□ 1.23
YBX1-201ENST00000321358 PAAF1Q9BRP4 392 aa22.76■■□□□ 1.23
YBX1-201ENST00000321358 CRACR2AQ9BSW2 395 aa22.76■■□□□ 1.23
YBX1-201ENST00000321358 TRIM5Q9C035 493 aa22.76■■□□□ 1.23
YBX1-201ENST00000321358 HCSTQ9UBK5 93 aa22.76■■□□□ 1.23
YBX1-201ENST00000321358 CACNG4Q9UBN1 327 aa22.76■■□□□ 1.23
YBX1-201ENST00000321358 LCHNA4D1U4 455 aa22.75■■□□□ 1.23
YBX1-201ENST00000321358 VNN1O95497 513 aa22.75■■□□□ 1.23
YBX1-201ENST00000321358 EHBP1Q8NDI1 1231 aa22.75■■□□□ 1.23
YBX1-201ENST00000321358 CLP1Q92989 425 aaKnown RBP22.75■■□□□ 1.23
YBX1-201ENST00000321358 NAP1L5Q96NT1 182 aaPredicted RBP22.75■■□□□ 1.23
YBX1-201ENST00000321358 ARHGEF37A1IGU5 675 aa22.74■■□□□ 1.23
YBX1-201ENST00000321358 TMEM189-UBE2V1I3L0A0 370 aa22.74■■□□□ 1.23
YBX1-201ENST00000321358 B4GALT3O60512 393 aa22.74■■□□□ 1.23
YBX1-201ENST00000321358 CA3P07451 260 aa22.74■■□□□ 1.23
YBX1-201ENST00000321358 LILRA4P59901 499 aa22.74■■□□□ 1.23
YBX1-201ENST00000321358 NR1I3Q14994 352 aa22.74■■□□□ 1.23
YBX1-201ENST00000321358 EPC2Q52LR7 807 aa22.74■■□□□ 1.23
YBX1-201ENST00000321358 ZNF667Q5HYK9 610 aa22.74■■□□□ 1.23
YBX1-201ENST00000321358 SARM1Q6SZW1 724 aa22.74■■□□□ 1.23
YBX1-201ENST00000321358 COLGALT1Q8NBJ5 622 aa22.74■■□□□ 1.23
YBX1-201ENST00000321358 CXorf38Q8TB03 319 aa22.74■■□□□ 1.23
YBX1-201ENST00000321358 TMEM169Q96HH4 297 aa22.74■■□□□ 1.23
YBX1-201ENST00000321358 PBX4Q9BYU1 374 aa22.74■■□□□ 1.23
YBX1-201ENST00000321358 SPG21Q9NZD8 308 aa22.74■■□□□ 1.23
YBX1-201ENST00000321358 ADAM28Q9UKQ2 775 aa22.74■■□□□ 1.23
YBX1-201ENST00000321358 LINC01553A4QN01 128 aa22.73■■□□□ 1.23
YBX1-201ENST00000321358 KPNA7A9QM74 516 aa22.73■■□□□ 1.23
YBX1-201ENST00000321358 NT5C1B-RDH14C9J2C7 533 aa22.73■■□□□ 1.23
YBX1-201ENST00000321358 STAU1O95793 577 aaKnown RBP22.73■■□□□ 1.23
YBX1-201ENST00000321358 ASS1P00966 412 aaKnown RBP22.73■■□□□ 1.23
YBX1-201ENST00000321358 MYOGP15173 224 aa22.73■■□□□ 1.23
YBX1-201ENST00000321358 PBX3P40426 434 aa22.73■■□□□ 1.23
YBX1-201ENST00000321358 TNNC1P63316 161 aa22.73■■□□□ 1.23
YBX1-201ENST00000321358 KRT17Q04695 432 aa22.73■■□□□ 1.23
YBX1-201ENST00000321358 WDR72Q3MJ13 1102 aa22.73■■□□□ 1.23
YBX1-201ENST00000321358 DSTYKQ6XUX3 929 aa22.73■■□□□ 1.23
YBX1-201ENST00000321358 TMEM130Q8N3G9 435 aa22.73■■□□□ 1.23
YBX1-201ENST00000321358 SEMA4DQ92854 862 aa22.73■■□□□ 1.23
YBX1-201ENST00000321358 SAMD11Q96NU1 681 aa22.73■■□□□ 1.23
YBX1-201ENST00000321358 XPO4Q9C0E2 1151 aaKnown RBP22.73■■□□□ 1.23
YBX1-201ENST00000321358 INTS2Q9H0H0 1204 aaKnown RBP22.73■■□□□ 1.23
YBX1-201ENST00000321358 PPEF2O14830 753 aa22.72■■□□□ 1.23
YBX1-201ENST00000321358 KIF4AO95239 1232 aa22.72■■□□□ 1.23
YBX1-201ENST00000321358 CTNNB1P35222 781 aa22.72■■□□□ 1.23
YBX1-201ENST00000321358 BMPR1AP36894 532 aa22.72■■□□□ 1.23
YBX1-201ENST00000321358 NOP14P78316 857 aaKnown RBP22.72■■□□□ 1.23
YBX1-201ENST00000321358 SMAD3P84022 425 aaKnown RBP22.72■■□□□ 1.23
YBX1-201ENST00000321358 ELAVL2Q12926 359 aaKnown RBP22.72■■□□□ 1.23
YBX1-201ENST00000321358 GSE1Q14687 1217 aa22.72■■□□□ 1.23
YBX1-201ENST00000321358 HASPINQ8TF76 798 aa22.72■■□□□ 1.23
YBX1-201ENST00000321358 NT5C1BQ96P26 610 aa22.72■■□□□ 1.23
YBX1-201ENST00000321358 PI4K2AQ9BTU6 479 aa22.72■■□□□ 1.23
YBX1-201ENST00000321358 XYLT2Q9H1B5 865 aa22.72■■□□□ 1.23
YBX1-201ENST00000321358 VRTNQ9H8Y1 702 aa22.72■■□□□ 1.23
YBX1-201ENST00000321358 SLC28A3Q9HAS3 691 aa22.72■■□□□ 1.23
YBX1-201ENST00000321358 NXF1Q9UBU9 619 aaKnown RBP22.72■■□□□ 1.23
YBX1-201ENST00000321358 STK39Q9UEW8 545 aa22.72■■□□□ 1.23
YBX1-201ENST00000321358 SF3B1O75533 1304 aaKnown RBP eCLIP22.72■■□□□ 1.236e-7■■■■■ 27
YBX1-201ENST00000321358 RALGAPA2Q2PPJ7 1873 aa22.72■■□□□ 1.23
YBX1-201ENST00000321358 TEX33O43247 280 aa22.72■■□□□ 1.23
YBX1-201ENST00000321358 SYCP1Q15431 976 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms