RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 RGMBQ6NW40 437 aa14.23□□□□□ -0.13
RFFL-201ENST00000315249 SPDL1Q96EA4 605 aa14.23□□□□□ -0.13
RFFL-201ENST00000315249 WNT8AQ9H1J5 351 aa14.23□□□□□ -0.13
RFFL-201ENST00000315249 EEF2KO00418 725 aaKnown RBP14.23□□□□□ -0.13
RFFL-201ENST00000315249 SLC16A3O15427 465 aaKnown RBP14.23□□□□□ -0.13
RFFL-201ENST00000315249 HSPA4LO95757 839 aa14.23□□□□□ -0.13
RFFL-201ENST00000315249 FGFR2P21802 821 aa14.23□□□□□ -0.13
RFFL-201ENST00000315249 BRD2P25440 801 aaKnown RBP14.23□□□□□ -0.13
RFFL-201ENST00000315249 GPAT2Q6NUI2 795 aa14.23□□□□□ -0.13
RFFL-201ENST00000315249 METTL7BQ6UX53 244 aa14.23□□□□□ -0.13
RFFL-201ENST00000315249 MIB1Q86YT6 1006 aa14.23□□□□□ -0.13
RFFL-201ENST00000315249 RICTORQ6R327 1708 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 IRF6O14896 467 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 VCPP55072 806 aaKnown RBP14.22□□□□□ -0.13
RFFL-201ENST00000315249 SESN3P58005 492 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 LBRQ14739 615 aaKnown RBP14.22□□□□□ -0.13
RFFL-201ENST00000315249 RBBP7Q16576 425 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 HS6ST3Q8IZP7 471 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 AGO4Q9HCK5 861 aaKnown RBP14.22□□□□□ -0.13
RFFL-201ENST00000315249 TMEM8AQ9HCN3 771 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 DDX4Q9NQI0 724 aaKnown RBP14.22□□□□□ -0.13
RFFL-201ENST00000315249 C3P01024 1663 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 FBXL21Q9UKT6 434 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 NFU1Q9UMS0 254 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 MAP3K13O43283 966 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 SHMT1P34896 483 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 ACADSBP45954 432 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 FXR2P51116 673 aaKnown RBP eCLIP14.22□□□□□ -0.13
RFFL-201ENST00000315249 AMHP03971 560 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 VIL1P09327 827 aaKnown RBP14.22□□□□□ -0.13
RFFL-201ENST00000315249 TROAPQ12815 778 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 NCK2O43639 380 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 KRT37O76014 449 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 CYP11B2P19099 503 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 ALDH5A1P51649 535 aaPredicted RBP14.22□□□□□ -0.13
RFFL-201ENST00000315249 EPHB3P54753 998 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 STK4Q13043 487 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 SYT2Q8N9I0 419 aaPredicted RBP14.22□□□□□ -0.13
RFFL-201ENST00000315249 RUSC1Q9BVN2 902 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 STK33Q9BYT3 514 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 NAMPTP43490 491 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 SESN2P58004 480 aaPredicted RBP14.22□□□□□ -0.13
RFFL-201ENST00000315249 EPC2Q52LR7 807 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 APOBEC3HQ6NTF7 200 aaKnown RBP14.22□□□□□ -0.13
RFFL-201ENST00000315249 HVCN1Q96D96 273 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 CYP4F11Q9HBI6 524 aa14.22□□□□□ -0.13
RFFL-201ENST00000315249 TMCC1O94876 653 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 ACO1P21399 889 aaKnown RBP14.21□□□□□ -0.13
RFFL-201ENST00000315249 PTK2BQ14289 1009 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 USP49Q70CQ1 688 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 METTL16Q86W50 562 aaKnown RBP14.21□□□□□ -0.13
RFFL-201ENST00000315249 KAZALD1Q96I82 304 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 POLR3CQ9BUI4 534 aaPredicted RBP14.21□□□□□ -0.13
RFFL-201ENST00000315249 BAIAP2L1Q9UHR4 511 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 TMEM88BA6NKF7 163 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 RABGGTAQ92696 567 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 HAUS8Q9BT25 410 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 SLC13A1Q9BZW2 595 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 CATSPERBQ9H7T0 1116 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 BCL2L12Q9HB09 334 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 EPS15L1Q9UBC2 864 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 COPEO14579 308 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 CAPRIN1Q14444 709 aaKnown RBP14.21□□□□□ -0.13
RFFL-201ENST00000315249 SMTNL2Q2TAL5 461 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 SYT17Q9BSW7 474 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 PHLPP1O60346 1717 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 DDHD2O94830 711 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 ANP32DO95626 131 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 PPIL2Q13356 520 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 PGM5Q15124 567 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 ACOT1Q86TX2 421 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 CCNYL1Q8N7R7 359 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 TACO1Q9BSH4 297 aaKnown RBP14.21□□□□□ -0.13
RFFL-201ENST00000315249 AIPL1Q9NZN9 384 aa14.21□□□□□ -0.13
RFFL-201ENST00000315249 CFLARO15519 480 aa14.21□□□□□ -0.14
RFFL-201ENST00000315249 SUN1O94901 812 aa14.21□□□□□ -0.14
RFFL-201ENST00000315249 APRTP07741 180 aa14.21□□□□□ -0.14
RFFL-201ENST00000315249 AKAP5P24588 427 aa14.21□□□□□ -0.14
RFFL-201ENST00000315249 SREBF1P36956 1147 aa14.21□□□□□ -0.14
RFFL-201ENST00000315249 SOX10P56693 466 aa14.21□□□□□ -0.14
RFFL-201ENST00000315249 SRRM1Q8IYB3 904 aaKnown RBP14.21□□□□□ -0.14
RFFL-201ENST00000315249 ZBTB18Q99592 522 aa14.21□□□□□ -0.14
RFFL-201ENST00000315249 FAM205AQ6ZU69 1335 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 EIF3DO15371 548 aaKnown RBP eCLIP14.2□□□□□ -0.14
RFFL-201ENST00000315249 ARHGAP25P42331 645 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 SLC11A2P49281 568 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 RRAGDQ9NQL2 400 aaPredicted RBP14.2□□□□□ -0.14
RFFL-201ENST00000315249 SNTG2Q9NY99 539 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 VWDEQ8N2E2 1590 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 KIF3CO14782 793 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 LAMTOR4Q0VGL1 99 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 CXCL17Q6UXB2 119 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 SLC25A41Q8N5S1 370 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 NIF3L1Q9GZT8 377 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 WDCPQ9H6R7 721 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 SPTLC1O15269 473 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 PGK1P00558 417 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 CHRNA3P32297 505 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 ARSEP51690 589 aa14.2□□□□□ -0.14
RFFL-201ENST00000315249 COPS2P61201 443 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms