RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 EFNA5P52803 228 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 PAK2Q13177 524 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 BRSK2Q8IWQ3 736 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 LENG1Q96BZ8 264 aaPredicted RBP13.26□□□□□ -0.29
RNF4-201ENST00000314289 KCNG1Q9UIX4 513 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 GTF3C4Q9UKN8 822 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 PTPN22Q9Y2R2 807 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 CES2O00748 559 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 SHOX2O60902 331 aaPredicted RBP13.26□□□□□ -0.29
RNF4-201ENST00000314289 MAPK4P31152 587 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 KCNJ1P48048 391 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 MCCD1P59942 119 aaPredicted RBP13.26□□□□□ -0.29
RNF4-201ENST00000314289 PPFIA1Q13136 1202 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 MMS22LQ6ZRQ5 1243 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 MCOLN2Q8IZK6 566 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 OR2W6PQ8NHA6 318 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 TCP11Q8WWU5 503 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 SCLT1Q96NL6 688 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 ZIM3Q96PE6 472 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 FAM118BQ9BPY3 351 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 CARD9Q9H257 536 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 ERAP1Q9NZ08 941 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 USTQ9Y2C2 406 aa13.26□□□□□ -0.29
RNF4-201ENST00000314289 IGKV6-21A0A0C4DH24 114 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 ABLIM1O14639 778 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 CYP1A2P05177 515 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 BRD2P25440 801 aaKnown RBP13.25□□□□□ -0.29
RNF4-201ENST00000314289 ECHS1P30084 290 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 SSR1P43307 286 aaKnown RBP13.25□□□□□ -0.29
RNF4-201ENST00000314289 ATP1A2P50993 1020 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 EMBQ6PCB8 327 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 KCNV1Q6PIU1 500 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 ZPBP2Q6X784 338 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 UBL4BQ8N7F7 174 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 ARL8AQ96BM9 186 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 PTPN18Q99952 460 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 IMPG2Q9BZV3 1241 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 MAF1Q9H063 256 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.25□□□□□ -0.29
RNF4-201ENST00000314289 PNMA3Q9UL41 463 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 POLIQ9UNA4 740 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 IQCA1LA6NCM1 817 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 ASB14A6NK59 587 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 OGTO15294 1046 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 PEX5P50542 639 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 ZNF792Q3KQV3 632 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 CDCA2Q69YH5 1023 aaPredicted RBP13.25□□□□□ -0.29
RNF4-201ENST00000314289 C11orf63Q6NUN7 778 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 MAMDC4Q6UXC1 1216 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 SH2D3CQ8N5H7 860 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 FAM107BQ9H098 131 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 KLHL11Q9NVR0 708 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 ATP8B3O60423 1300 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 MROH7Q68CQ1 1323 aa13.25□□□□□ -0.29
RNF4-201ENST00000314289 GPR25O00155 361 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 ADCY6O43306 1168 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 HBP1O60381 514 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 ZC3H11AO75152 810 aaKnown RBP eCLIP13.24□□□□□ -0.291e-9■■■■□ 22
RNF4-201ENST00000314289 CELF2O95319 508 aaKnown RBP13.24□□□□□ -0.29
RNF4-201ENST00000314289 C22orf31O95567 290 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 SNAI1O95863 264 aaPredicted RBP13.24□□□□□ -0.29
RNF4-201ENST00000314289 TMEM191BP0C7N4 346 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 CDH8P55286 799 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 PDCLQ13371 301 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 TRPC3Q13507 836 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 CENPHQ9H3R5 247 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 IFT122Q9HBG6 1241 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 CPSF3Q9UKF6 684 aaKnown RBP13.24□□□□□ -0.29
RNF4-201ENST00000314289 EIF3HO15372 352 aaKnown RBP eCLIP13.24□□□□□ -0.29
RNF4-201ENST00000314289 MNAT1P51948 309 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 MBTD1Q05BQ5 628 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 SNX1Q13596 522 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 ENOSF1Q7L5Y1 443 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 CALR3Q96L12 384 aaKnown RBP13.24□□□□□ -0.29
RNF4-201ENST00000314289 CDT1Q9H211 546 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 ADAM22Q9P0K1 906 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 MGAMO43451 1857 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 HTTP42858 3142 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 LOC102724159A0A0B4J2E5 919 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 ACKR2O00590 384 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 ZEB2O60315 1214 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 CPP00450 1065 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 NFICP08651 508 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 HOXC6P09630 235 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 CETPP11597 493 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 ABCD1P33897 745 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 CCNA1P78396 465 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 DR1Q01658 176 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 PWP2Q15269 919 aaKnown RBP13.24□□□□□ -0.29
RNF4-201ENST00000314289 DUOXA2Q1HG44 320 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 TTC27Q6P3X3 843 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 MPZL3Q6UWV2 235 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 DPH6Q7L8W6 267 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 GPR142Q7Z601 462 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 PNMA8AQ86V59 439 aaPredicted RBP13.24□□□□□ -0.29
RNF4-201ENST00000314289 PRELID2Q8N945 189 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 MAGOHBQ96A72 148 aaKnown RBP13.24□□□□□ -0.29
RNF4-201ENST00000314289 HEMGNQ9BXL5 484 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 CISHQ9NSE2 258 aa13.24□□□□□ -0.29
RNF4-201ENST00000314289 CPA4Q9UI42 421 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms