RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 RASSF2P50749 326 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 OAZ1P54368 228 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 ARL4CP56559 192 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 FKBP1CQ5VVH2 108 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 ITIH5Q86UX2 942 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 UCMAQ8WVF2 138 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 ULK4Q96C45 1275 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 DEFB118Q96PH6 123 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 C17orf75Q9HAS0 396 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 SERPIND1P05546 499 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 MAP4P27816 1152 aaKnown RBP11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 HADHAP40939 763 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 PCSK7Q16549 785 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 HP1BP3Q5SSJ5 553 aaPredicted RBP11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 TRIM42Q8IWZ5 723 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 SRRM1Q8IYB3 904 aaKnown RBP11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 SCG3Q8WXD2 468 aaKnown RBP11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 ATP9BO43861 1147 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 PGK1P00558 417 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 SNRPFP62306 86 aaKnown RBP11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 POU5F1BQ06416 359 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 FGD4Q96M96 766 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 SRPK1Q96SB4 655 aaKnown RBP11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 PDE11AQ9HCR9 933 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 TTC36A6NLP5 189 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 KCNN4O15554 427 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 IFNAR2P48551 515 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 PPP4R4Q6NUP7 873 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 SYT2Q8N9I0 419 aaPredicted RBP11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 AGAP3Q96P47 875 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 FMO2Q99518 471 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 THG1LQ9NWX6 298 aaKnown RBP11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 SNTG2Q9NY99 539 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 CDC23Q9UJX2 597 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 ITM2BQ9Y287 266 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 SYNCRIPO60506 623 aaKnown RBP11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 RNASEH1O60930 286 aaKnown RBP11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 ACSL3O95573 720 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 SFSWAPQ12872 951 aaKnown RBP11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 GPS1Q13098 491 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 RUSC1Q9BVN2 902 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 MTMR12Q9C0I1 747 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 PDGFDQ9GZP0 370 aaPredicted RBP11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 STK38LQ9Y2H1 464 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 PCDHAC2Q9Y5I4 1007 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 AVPR1AP37288 418 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 MAPK8IP2Q13387 824 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 ZNF211Q13398 564 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 KIF19Q2TAC6 998 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 CXCL17Q6UXB2 119 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 DHX40Q8IX18 779 aaKnown RBP11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 ATP6V0D2Q8N8Y2 350 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 HVCN1Q96D96 273 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 CAPNS2Q96L46 248 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 WNT8AQ9H1J5 351 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 TXNDC9O14530 226 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 GTF2H1P32780 548 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 CCL23P55773 120 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 PLD1Q13393 1074 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 CACNA2D3Q8IZS8 1091 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 CARNMT1Q8N4J0 409 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 PPHLN1Q8NEY8 458 aaKnown RBP11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 TINF2Q9BSI4 451 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 VCX3BQ9H321 246 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 SIGLEC1Q9BZZ2 1709 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 TMEM247A6NEH6 219 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 TMCC1O94876 653 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 ORC1Q13415 861 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 IDI2Q9BXS1 227 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 MROH7Q68CQ1 1323 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 MIF4GDA9UHW6 222 aaKnown RBP11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 CYP11B2P19099 503 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 AKAP5P24588 427 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 BRD2P25440 801 aaKnown RBP11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 RCN2Q14257 317 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 SCFD1Q8WVM8 642 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 SDCCAG3Q96C92 435 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 SLC4A9Q96Q91 983 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 ZNF177Q13360 481 aaPredicted RBP11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 CATSPERGQ6ZRH7 1159 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 CD99L2Q8TCZ2 262 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 ZNF541Q9H0D2 1346 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 EIF3EP60228 445 aaKnown RBP11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 RPL10AP62906 217 aaKnown RBP11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 AMPD2Q01433 879 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 DHX9Q08211 1270 aaKnown RBP11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 FAM171A1Q5VUB5 890 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 ZNF280DQ6N043 979 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 ARMC6Q6NXE6 501 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 LLGL2Q6P1M3 1020 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 CSGALNACT1Q8TDX6 532 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 PPP1R13LQ8WUF5 828 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 CLMNQ96JQ2 1002 aa11.28□□□□□ -0.6
SYNPO2-201ENST00000307142 SEMA3FQ13275 785 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 DBN1Q16643 649 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 Q4G0T1 1027 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 GPAT2Q6NUI2 795 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 KAZALD1Q96I82 304 aa11.27□□□□□ -0.6
SYNPO2-201ENST00000307142 RNF14Q9UBS8 474 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms